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Gene PSME3 of fat thickness at back of pig as well as preparation method

A technology for pig backfat thickness and genetics, applied in the field of genetic engineering, can solve problems such as research gaps, low efficiency, and neglect of gene interactions.

Inactive Publication Date: 2004-05-26
HUAZHONG AGRI UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0007] The function of the PA28-γ subunit is still not very clear. Murata et al. (Murata S et al., Growth retardation in micelacking the proteasome activator PA28γ: J Biol Chem: 1999, 274: 38211-38215:) used homologous recombination to obtain the deletion of PSME3 Homozygous and heterozygous mice for the region of exons 2 to 8 of the gene, compared with normal mice, these mice were born with normal appearance in all tissues studied, but postnatal growth was retarded, indicating that The function of PSME3 gene may be related to the regulation of cell proliferation and body growth in mice
[0008] Although some important progress has been made in the research on candidate genes of pig backfat thickness, there are still some deficiencies: (1) The important economic traits of pigs are usually quantitative traits, and the physiological and biochemical processes involved are quite complicated. Although 1-2 of its controlled genes have been revealed, there are still other novel genes with large effects to be discovered
(2) The current research on quantitative trait genes basically selects a single candidate gene for analysis, ignoring the interaction between genes
One of the contents of modern molecular breeding is genome breeding, which is based on the overall or whole genome selection, mating, species conservation and heterosis analysis and utilization based on the organizational structure and functional effects of the genes and genotypes of all traits of the individual. A complete high-density gene map, and a full understanding of the organizational structure of all genes, the mechanism of functional expression regulation, and the association with traits. However, the genes and markers that have been genetically and physically mapped in pigs are still very limited. Work in this area still needs to be further strengthened
(3) The method for finding genes with important physiological functions is not comprehensive enough, the number of detected genes is limited, the efficiency is not high, and innovation is needed, and further work to find new genes related to important economic traits of pigs is imminent
[0009] However, the research on porcine PSME3 gene at home and abroad is still blank

Method used

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  • Gene PSME3 of fat thickness at back of pig as well as preparation method
  • Gene PSME3 of fat thickness at back of pig as well as preparation method
  • Gene PSME3 of fat thickness at back of pig as well as preparation method

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0134] Example 1: Association analysis of pig marker traits

[0135] In a commercial group of large white pigs, the association analysis of the AluI-RFLP polymorphism site in exon 8 of PSME3 gene and some production traits was carried out. The traits analyzed were birth weight, weaning weight, and background fat thick.

[0136] The results of genotype detection showed that the AA genotype accounted for the vast majority of the 201 individuals, with 182 individuals, and 18 individuals with the AB genotype. The results of the simple mean and standard deviation analysis of traits between the AA and AB genotypes were summarized in Table 5, the analysis results show that there is a significant difference in the backfat thickness between the AA and AB genotypes at 170 days of slaughter (P<0.05), and there is a correlation trend between this locus and the birth weight (P=0.11).

[0137] Table 5: Association analysis of different PSME3 gene AluI-RFLP genotypes and some production ...

Embodiment 2

[0145] Example 2: Association analysis of pig marker traits

[0146] In a Tongcheng pig herd, the association analysis between the AluI-RFLP polymorphism of exon 8 of the PSME3 gene and some production traits was carried out. The traits analyzed were birth weight and backfat thickness when slaughtered up to 90 kg. The analysis results showed that the backfat thickness of BB and AB genotypes was significantly different (P<0.05) (Table 6)

[0147] Table 6: Association analysis of different PSME3 gene AluI-RFLP genotypes and some production traits

[0148] Genotype Number of individuals Birth weight Backfat thickness

[0149] Genotypes N Birth weight Backfat thickness 1

[0150] (kg) (mm)

[0151] BB90 1.1±0.27 12.18±2.11

[0152] AB 18 1.21±0.31 11.07±1.86

[0153] P value 0.16 0.04

[0154] P-value

Embodiment 3

[0155] Example 3: Distribution of PCR-RFLP-AluI polymorphism in various pig breeds

[0156] The PCR-RFLP-AluI polymorphism of porcine PSME3 gene was detected in 6 pig breeds, and the detection results are as described in Table 7. The data analysis in Table 7 shows that among the detected pig breeds, Duroc and Guizhou The frequencies of the dominant allele A in Xiang pigs were 0.8475 and 0.6406, respectively, while the frequencies of the dominant allele B in Erhualian, Tongcheng and Dazi pigs were 0.9688, 0.7884 and 0.6539, respectively. The frequencies of A and allele B are close, 0.4255 and 0.5745, respectively.

[0157] Table 7 Genotype and gene frequency of PSME3 gene AluI polymorphism in several pig breeds

[0158] Genotype Allele frequency

[0159] number of individuals

[0160] Variety

[0161] Genotype Allele frequency

[0162] No: of

[0163] Breeds

[0164] ...

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Abstract

The present invention relates to the cloning and preparing process of the pig gene P3ME3 associated with thickness of back fat. Its cDNA and DNA sequences are cloned. The base mutation at three sites are detected, One of them is associated with the thickness of back fat. A process for preparing said gene and the primer sequence for detecting the base mutation at three sites are also disclosed.

Description

technical field [0001] The invention belongs to the technical field of genetic engineering, and in particular relates to the cloning and preparation method of pig backfat thickness PSME3 gene. Background technique [0002] With the continuous growth of people's demand for animal protein food and the development of commodity economy, carcass quality evaluation has become a common concern of geneticists, breeders, producers, meat dealers and consumers. With the development of domestic and foreign live pig and pork product commodity markets and the improvement of scientific and technological level, the standardization and standardization of carcass quality evaluation have become research hotspots. The currently recognized carcass quality evaluation indicators in the world include: carcass lean meat Lean percentage in the carcass (CLP), lean content in the carcass (CLC) or marketable lean cuts ratio (lean cuts ratio, LCR). In practical work, ...

Claims

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Application Information

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IPC IPC(8): C07H21/04C12N15/11C12P19/34C12Q1/68
Inventor 李奎余梅刘榜熊统安赵书红潘佩文王彦芳朱猛进樊斌
Owner HUAZHONG AGRI UNIV
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