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Novel minor groove binders

A compound, methyl technology, applied in the field of synthetic compounds, can solve problems such as no display instructions

Active Publication Date: 2014-01-01
UNIV OF STRATHCLYDE
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

In addition, nothing has been shown to suggest that vinylidene-containing compounds may have any advantage over compounds containing other linkages such as amino groups

Method used

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  • Novel minor groove binders
  • Novel minor groove binders
  • Novel minor groove binders

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0694] 4-({[4-({4-[(E)-2-(3-methoxyphenyl)vinyl]benzoyl}amino)-1-methyl-1H-pyrrol-2-yl]carboxyl }amino)-1-methyl-N-[2-(4-morpholinyl)ethyl]-1H-pyrrole-2-amide, trifluoroacetate

[0695] To 4-amino-1-methyl-N-[1-methyl-5-({[2-(4-morpholinyl)ethyl]amino}carbonyl)-1H-pyrrole dissolved in DMF (1mL) -3-yl]-1H-pyrrole-2-amide (46 mg, 0.124 mmol; see Preparation 1 above) was added with stirring at room temperature HBTU (100 mg, 0.264 mmol), 4-[(E)-2-(3-methoxybenzene yl)vinyl]benzoic acid (32 mg, 0.124 mmol; see Preparation 4 above). The reaction mixture was left at room temperature overnight. The product was purified by HPLC (without work-up) to afford the title compound (26 mg, 29%) as a pale yellow solid with no apparent melting point.

[0696] 1 H NMR (DMSO-d 6 ): 10.32 (1H, s), 9.97 (1H, s), 9.68 (1H, br), 8.23 ​​(1H, t, 5.6Hz), 7.97 (2H, d, 8.4Hz), 7.75 (2H, d, J =5.6Hz), 7.3-7.29(4H, m), 7.22(2H, m), 7.12(1H, d, J=1.5Hz), 7.00(1H, d, J=1.5Hz), 6.90(1H, dd , J=1.5Hz & J...

Embodiment 2

[0700] 1-methyl-4-({[1-methyl-4-{4-[(E)-2-(3-quinoline)vinyl]benzoyl}amino)-1H-pyrrole-2-] Carbonyl}amino)-N-[2-(4-morpholine)ethyl]-1H-pyrrole-2-amide, trifluoroacetate

[0701] To 4-amino-1-methyl-N-[1-methyl-5-({[2-(4-morpholinyl)ethyl]amino}-carbonyl)-1H- dissolved in DMF (1 mL) Pyrrol-3-yl]-1H-pyrrole-2-amide (46 mg, 0.124 mmol; see Preparation 1 above) was added with stirring at room temperature HBTU (100 mg, 0.264 mmol), 4-[(E)-2-(3- Quinoline)vinyl]benzoic acid (34 mg, 0.123 mmol; see Preparation 5 above). The reaction mixture was left at room temperature overnight. The product was purified by HPLC (no workup) to afford the title compound (36 mg, 39%) as a pale yellow solid with no apparent melting point.

[0702] 1 H NMR (DMSO-d 6 ): 10.35(1H, s), 9.98(1H, s), 9.55(1H, br), 9.28(1H, d, J=2.0Hz), 8.59(1H, d, J=2.0Hz), 8.23(1H , t, J=8.0Hz), 8.05-7.97 (5H, m), 7.83-7.75 (4H; m), 7.70-7.60 (4H, m), 7.34 (1H, d, J=1.7Hz), 7.21 ( 1H, d, J = 1.7Hz), 7.13 (1H, d, J ...

Embodiment 3

[0706] 1-methyl-N-[1-methyl-5-{[2-(4-morpholinyl)ethyl]amino}carbonyl-1H-pyrrol-3-yl]-4-{[(4-( E)-2-(1-Methyl-1H-pyrrol-2-yl)vinyl]benzoyl}amino)-1H-pyrrole-2-amide, trifluoroacetate

[0707] (i) 1-methyl-4-{[(1-methyl-4-amino-1H-pyrrol-2-yl)carbonyl]amino}-N-[2-(4-morpholinyl)ethyl]-1H- Pyrrole-2-amide

[0708] 1-methyl-4-{[(1-methyl-4-nitro-1H-pyrrol-2-yl)carbonyl]amino}-N-[2-(4-morpholinyl)ethyl]- 1H-Pyrrole-2-amide (86 mg, 0.212 mmol; see Preparation 1(iv) above) was suspended in methanol (25 mL), to which Pd / C-10% (80 mg) was added with stirring at 0 °C under nitrogen. The reaction mixture was hydrogenated at room temperature and pressure for 4 hours. The catalyst was removed over celite and methanol was removed under reduced pressure to yield the amine, which was dissolved in DMF (1 mL, dry). The resulting amine was used in the next step without purification.

[0709] (ii) 1-methyl-N-[1-methyl-5-({[2-(4-morpholinyl)ethyl]amino)carbonyl}-1H-pyrrol-3-yl]-4-{[4- ...

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Abstract

There is provided compounds of formula (I), wherein R1, R11, R12, Qa, X, Qb, Qc, A and D have meanings given in the description, or a pharmaceutically acceptable salt or solvate thereof, which compound, salt or solvate binds to the minor groove of DNA.

Description

technical field [0001] The present invention relates to synthetic compounds that have an affinity for nucleic acids, particularly compounds that bind to the minor groove of DNA. Background technique [0002] The listing or discussion of prior-published documents in this specification should not necessarily be taken as an admission that the document is prior art or common general knowledge. [0003] Due to its fundamental role in molecular biological processes, DNA represents an important target for drug action. Compounds that recognize defined sequences of DNA have a variety of potential uses, such as modulating gene expression. [0004] The outer surface of the double helical DNA has two grooves called the major groove and the minor groove. Each of these grooves includes chemical information expressed via the arrangement of hydrogen-bonding donors and acceptors, electrostatic charges, dipoles, hydrophobic regions, and the like. [0005] Depending on the number of potenti...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): A61P35/00A61K31/4025C07D403/12C07D207/34C07D409/14C07D403/14
CPCC07D403/12C07D403/14C07D409/14C07D207/34A61P31/00A61P31/04A61P31/10A61P31/12A61P33/00A61P33/06A61P35/00A61K31/4025
Inventor A·哈拉夫C·萨克林R·韦
Owner UNIV OF STRATHCLYDE