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Method for simultaneously detecting multiple miRNAs through fluorescence method

A fluorescence method and fluorescence technology, applied in the field of biosensing, can solve the problems of less than 15% overall survival rate of NSCLC, difficult application of biosensors, high sequence similarity, and achieve the goal of reducing detection cost, low cost and simplifying detection method. Effect

Active Publication Date: 2017-06-13
SOUTHEAST UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Although great progress has been made in lung cancer imaging examination and targeted therapy in recent years, the 5-year overall survival rate of NSCLC is still less than 15%.
However, the analytical detection of miRNAs remains challenging due to their unique properties, including short size, high sequence similarity (homology), tolerance to degradation, etc., making miRNAs more difficult to apply to nucleic acid hybridization-based biological Therefore, in the field of sensors, there is an urgent need to develop a series of methods for rapid, sensitive and multi-channel detection of miRNA in the future.

Method used

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  • Method for simultaneously detecting multiple miRNAs through fluorescence method
  • Method for simultaneously detecting multiple miRNAs through fluorescence method
  • Method for simultaneously detecting multiple miRNAs through fluorescence method

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0034] (1) Preparation of probes and selection of fluorescent donors

[0035] The fluorescein Cy3-labeled nucleic acid probe corresponding to miRNA-155 is P1, the fluorescein Cy3.5-labeled nucleic acid probe corresponding to miRNA-182 is P2, and the fluorescein Cy5-labeled nucleic acid probe corresponding to miRNA-197 is The needle is P3, the auxiliary probe prepared corresponding to miRNA-155 is L1, the auxiliary probe prepared corresponding to miRNA-182 is L2, the auxiliary probe prepared corresponding to miRNA-197 is L3, and the nucleic acid dye TOTO-1 is selected as fluorescent donor. Among them, the nucleic acid sequences of miRNA-155, miRNA-182, miRNA-197, fluorescein-labeled nucleic acid probes P1, P2, P3 and auxiliary probes L1, L2, L3 are shown in Table 1.

[0036] Table 1

[0037]

[0038] (2) Principle verification

[0039] Take 8 EP tubes, add 10nM L1, P1′ (unlabeled fluorescein Cy3 nucleic acid probe), miRNA-155 to the first tube, add 10nM L1, P1, miRNA-155 ...

Embodiment 2

[0058] (1) Preparation of probes and selection of fluorescent donors

[0059] See Example 1, part (1).

[0060] (2) Principle verification

[0061]Take 8 EP tubes, add 5nM L1, P1′ (unlabeled fluorescein Cy3 nucleic acid probe), miRNA-155 to the first tube, add 5nM L1, P1, miRNA-155 to the second tube, add 5nM L2, P2, miRNA-182, add 5nM L3, P3, miRNA-197 to the fourth tube, add 5nM L1, P1, miRNA-155 and L2, P2, miRNA-182 to the fifth tube, add 5nM L1, P1, miRNA-155 and L3, P3, miRNA-197, add 5nM L2, P2, miRNA-182 and L3, P3, miRNA-197 to the seventh tube, add 5nM L1, P1, miRNA-155, L2, P2, miRNA-182 and L3, P3, miRNA-197.

[0062] Eight tube samples were hybridized in DNAse / RNAase-free 1×PBS at 20°C for 4 hours. 100 nM TOTO-1 was added to the reaction solution, the total reaction volume was 500 μL, and after 2 hours of reaction at 20° C., the fluorescence was excited at 440 nm to detect the fluorescence emission spectrum of the above solution.

[0063] Experimental result ...

Embodiment 3

[0077] (1) Preparation of probes and selection of fluorescent donors

[0078] See Example 1, part (1).

[0079] (2) Principle verification steps

[0080] Take 8 EP tubes, add 10nM L1, P1′ (unlabeled fluorescein Cy3 nucleic acid probe), miRNA-155 to the first tube, add 10nM L1, P1, miRNA-155 to the second tube, add 10nM L2, P2, miRNA-182, add 10nM L3, P3, miRNA-197 to the fourth tube, add 10nM L1, P1, miRNA-155 and L2, P2, miRNA-182 to the fifth tube, add 10nM L1, P1, miRNA-155 and L3, P3, miRNA-197, add 10nM L2, P2, miRNA-182 and L3, P3, miRNA-197 to the seventh tube, add 10nM L1, P1, miRNA-155, L2, P2, miRNA-182 and L3, P3, miRNA-197.

[0081] Eight tubes of samples were hybridized in DNAse / RNAase-free 1×PBS at 37°C for 3 hours. Add 100 nM TOTO-1 to the reaction solution respectively, the total reaction volume is 500 μL, react at 37° C. for 1 hour, excite at 440 nm with a fluorescence instrument, and detect the fluorescence emission spectrum of the above solution.

[008...

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Abstract

The invention discloses a method for simultaneously detecting the concentration of multiple miRNAs through a fluorescence method. The method comprises the steps of selecting miRNAs; preparing a fluorescein-labelled nucleic acid probe; selecting a fluorescence donor; calculating fluorescent crosstalk correction factors of fluorescein corresponding to the multiple miRNAs; obtaining a corresponding relationship between the fluorescence intensity of the corrected fluorescein corresponding to the multiple miRNAs and the concentration of the miRNAs; and detecting fluorescence signals of the fluorescein corresponding to the multiple miRNAs in a to-be-detected miRNA solution and calculating the concentration of the miRNAs by using the corresponding relationship between the fluorescence intensity of the corrected fluorescein corresponding to the multiple miRNAs and the concentration of the miRNAs. Simultaneous detection of multiple miRNAs is achieved by using single wavelength excitation; the detection method is simplified; the interference between a background signal and fluorescein signals is effectively reduced; the concentration of any miRNA in the solution can be accurately measured; and the method is low in cost, fast, simple, sensitive and good in specificity.

Description

technical field [0001] The invention belongs to the technical field of biosensing, and in particular relates to a method for simultaneously detecting multiple miRNAs through a fluorescence method. Background technique [0002] Lung cancer is the leading cause of cancer death worldwide, with more than 1 million deaths due to lung cancer each year, of which non-small cell lung cancer (NSCLC) accounts for more than 80%, including adenocarcinoma, squamous cell carcinoma and large cell carcinoma. cancer. Although great progress has been made in lung cancer imaging examination and targeted therapy in recent years, the 5-year overall survival rate of NSCLC is still less than 15%. The lack of effective early diagnosis is the main reason for the poor prognosis of NSCLC. Most patients are already in the middle and advanced stage when they are clinically diagnosed, and have lost the opportunity for radical surgery. Examinations such as chest X-ray and CT have low specificity, while ...

Claims

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Application Information

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IPC IPC(8): G01N21/64
CPCG01N21/6486
Inventor 卫伟刘元建刘松琴
Owner SOUTHEAST UNIV
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