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Deamination of organophosphorus-nucleosides

A technology of nucleoside deaminase and cytidine deaminase, which is applied to the deamination of intermediates or prodrugs, cytidine organophosphate NA and its pharmaceutical fields, and can solve the problems of inability to obtain deamination products and the like

Active Publication Date: 2018-03-27
INST UNIV DE CIENCIA I TECH SA
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

The inventors have demonstrated that the same biocatalytic reaction but using cytidine nucleotides as substrates does not lead to the corresponding deamination products

Method used

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  • Deamination of organophosphorus-nucleosides
  • Deamination of organophosphorus-nucleosides
  • Deamination of organophosphorus-nucleosides

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 9

[0198] Embodiment 9: ((((2R,3S,4R,5R)-5-(4-amino-2-oxopyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methoxy) Preparation of (phenoxy)phosphoryl)-L-leucine methyl ester hydrochloride (compound 10):

[0199] - Step 1: Protection of cytidine (compound 1) to provide 2',3'-protected cytidine (compound 8):

[0200]

[0201] To a 100 mL round bottom flask equipped with a reflux condenser was added cytidine (4.41 g, 18.1 mmol) suspended in anhydrous acetone (44 mL). To the stirred suspension, add activated Molecular sieves and H 2 SO 4 98% (0.145 mL, 2.7 mmol, 0.15 equiv). The suspension was stirred at 50°C. After 16 h at room temperature, NaHCO was added 3 (2 g), and the mixture was stirred for 0.5 hours. Then, the crude mixture was vacuum filtered. The resulting solid was washed with MeOH / EtOH 1 / 1 (2 x 20 mL). The organic phases were combined and evaporated to dryness to obtain 2',3'-protected cytidine (Compound 8, 1.33 g, 25.8%) as a white solid.

[0202] 1...

Embodiment 10

[0216] Example 10: ((((2R,3S,4R,5R)-5-(4-amino-2-oxopyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methoxy) Preparation of (phenoxy)phosphoryl)-L-valine methyl ester hydrochloride (compound 12):

[0217] - Step 1: Preparation of ((4-nitrophenoxy)(phenoxy)phosphoryl)-L-valine methyl ester (compound 5):

[0218]

[0219] Following the procedure described for compound 4, using 4-phosphoryl 4-nitrophenyl dichloride (0.5 g, 1.95 mmol) and L-valine methyl ester hydrochloride (0.327 g, 1.95 mmol), to give ((4-Nitrophenoxy)(phenoxy)phosphoryl)-L-valine methyl ester (654 mg, yield 81.9%) as a colorless oil.

[0220] 1 H-NMR (δ, ppm): 8.28 (d, J=8.8Hz, 2H), 7.46 (dd, J=8.9, 3.4, 2H), 7.38 (t, J=7.6Hz, 2H), 7.26 (m, 3H), 3.75 (dt, J = 10.4, 6.3, 1H), 3.60 (s, 3H), 2.02 (m, 1H), 0.87 (t, J = 7.8Hz, 6H).

[0221] - Step 2: Coupling compound (8) with compound (5) to provide ((((3aR,4R,6R,6aR)-6-(4-amino-2-oxopyrimidin-1(2H)-yl )-2,2-Dimethyltetrahydrofuro[3,4-d][1,3]dioxola...

Embodiment 11

[0229] Example 11: ((((2R,3S,4R,5R)-5-(4-amino-2-oxopyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methoxy) Preparation of (phenoxy)phosphoryl)-L-alanine isopropyl hydrochloride (compound 14):

[0230] - Step 1: Preparation of ((4-nitrophenoxy)(phenoxy)phosphoryl)-L-alanine isopropyl ester (compound 6):

[0231]

[0232] Following the procedure for compound 4 using 4-phosphoryl 4-nitrophenyl dichloride (1.0 g, 3.90 mmol) and L-alanine isopropyl ester hydrochloride (0.655 g, 3.90 mmol) gave ( (4-Nitrophenoxy)(phenoxy)phosphoryl)-L-alanine isopropyl ester (1.11 g, 70% yield) as a colorless oil.

[0233] 1 H-NMR (δ, ppm): 8.28 (d, J=8.8Hz, 2H), 7.46 (dd, J=15.8, 8.4, 2H), 7.39 (m, 2H), 7.26 (m, 3H), 4.93 ( dt, J = 12.5, 6.2, 1H), 4.01 (m, 1H), 1.32 (m, 3H), 1.19 (t, J = 5.9 Hz, 6H).

[0234] - Step 2: Coupling compound 8 with compound 6 to provide ((((3aR,4R,6R,6aR)-6-(4-amino-2-oxopyrimidin-1(2H)-yl)-2, 2-Dimethyltetrahydrofuro[3,4-d][1,3]dioxolan-4-yl)methoxy)(...

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Abstract

The invention relates to a new synthethic process for obtaining compounds of formula (I) from compounds of formula (II) by means of cytidine deaminase enzymes.

Description

technical field [0001] The present invention relates to a novel enzymatic process for the deamination of nucleosides, in particular for the deamination of cytidine organophosphorus-nucleoside analogs (NA), more particularly for those with bulky substituents ( bulky substitute) of cytidine organophosphate NA and its drug, intermediate or prodrug deamination. Background technique [0002] Nucleoside analogs (NAs) are synthetic compounds that are structurally related to natural nucleosides. In terms of their structure, nucleosides are composed of three key units: (i) a hydroxymethyl group, (ii) a heterocyclic nitrogenous base moiety, and (iii) a furanose ring, which in some instances appears to serve as A spacer that presents the hydroxymethyl group and the base in the correct orientation. [0003] NA is widely used as antiviral and antitumor drugs. These molecules have traditionally been synthesized by different chemical approaches that often require time-consuming multi-st...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12P19/30C12P9/00C12P17/16C07H19/06C07H19/10
CPCC07H19/06C07H19/10C12P19/30C07H19/12C12P19/305C12Y305/04005C12P19/12
Inventor S·佩雷斯奥兹卡里兹M·帕斯卡尔吉拉波特J·阿朗索费尔南德斯C·洛佩兹戈麦兹C·M·费尔南德斯费尔南德斯J·卡斯泰尔斯波利亚特
Owner INST UNIV DE CIENCIA I TECH SA