Human liver cancer marker and application thereof
A marker and liver cancer technology, applied in the field of biomedicine, can solve the problems of less cancer research, no report on the role of liver cancer, and decreased expression of GPT
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Embodiment 1
[0038] Example 1: Bioinformatics analysis: using the GEO tumor public database to retrieve the liver cancer expression profile data in the database, the research team collected and sorted it out in the early stage and then applied to search the liver cancer expression profile data set in the GEO tumor gene chip public data set and the TCGA database The HCC cohort included 10 datasets with matched cancer and paracancerous samples (see Table 1), with a total of 1255 paracancerous and 1476 liver cancer tissues. Download the liver cancer expression profile sequencing data queue, analyze the expression of GPT gene in liver cancer and para-cancerous tissues in different research cohorts, analysis method: use BRB-array tools gene expression analysis tool, import the downloaded liver cancer expression profile file, select mRNA as the data type , export the expression data of GPT, and carry out the matching of clinical data, and carry out the difference analysis, the result indicates th...
Embodiment 2
[0041]Example 2: Using the TCGA tumor public database to download the expression profile sequencing data of liver cancer. Analyze the expression of GPT gene in liver cancer and para-cancerous tissues, analysis method: use BRB-array tools gene expression analysis tool, import the downloaded liver cancer expression profile file, select mRNA as the data type, export the expression data of GPT, and carry out clinical data analysis The results of GPT showed significantly low expression in liver cancer; then KM survival analysis results showed that the overall survival rate of patients with low GPT expression was significantly lower than that of patients with low GPT expression, and the patients with low GPT expression The progression-free survival rate was significantly lower than that of patients with low expression of GPT.
Embodiment 3
[0042] Example 3: Analysis of the expression of GPT protein in liver cancer and adjacent normal tissues by immunohistochemistry
[0043] Tissue chip: using the pan-tumor tissue chip constructed by the research group, the source of the tissue sample is the First Affiliated Hospital of Zhengzhou University, where the tumor type includes (), and the clinical information includes gender, age, TNM, tumor size,
[0044] Staging, grading, follow-up information, etc. The diameter of the chip sample points is 1.5mm, and the fixation method is formalin; at the same time, a commercial tissue chip (Shanghai Xinchao Biotechnology Co., Ltd.) is used. Including gender, age, TNM, tumor size,
[0045] Staging, grading, follow-up information, etc. The diameter of the chip sample points is 1.5mm, and the fixation method is formalin fixation. The main operation steps of immunohistochemistry: put the tissue chip into the oven, adjust the temperature to 63 degrees, and bake the wax for one hour;...
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