A kind of lung cancer detection reagent and kit
A technology for detection reagents and kits, which is applied in the field of lung cancer detection reagents and kits, can solve the problems of limitation, patient loss, non-invasive screening of lung cancer, etc., and achieve high specificity and sensitivity, and a wide range of applications
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Embodiment 1
[0088] The inventors screened hundreds of gene markers and nucleic acid fragments, studied the distribution of methylation sites of each gene, and designed primers and probes for real-time fluorescence quantitative methylation-specific polymerase chain reaction (real-time fluorescent quantitative PCR). quantitative methylation-specific PCR, qMSP) detection. Screening is performed in tissue samples, and the β-actin gene is used as an internal reference gene, and the nucleic acid fragment shown in SEQ ID NO: 4 is finally obtained through screening, which has better detection results for lung cancer. The detection effect of SEQ ID NO: 4 fragment and commonly used lung cancer detection gene markers (PCDHGA12, HOXD8) was compared, and each gene detection primer probe was as follows:
[0089] The detection primers and probes for nucleic acid fragments are:
[0090] SEQ ID NO: 1 Primer F: TCGTGTGTCGTCGTTCAGAC
[0091] SEQ ID NO: 2 Primer R: GAAATACCCGCGAAAATACTG
[0092] SEQ ID NO...
Embodiment 2
[0129] Example 2: Detection in sputum samples
[0130] Sample information: A total of 107 sputum samples were tested, including 51 normal control samples, 56 cancer control samples, 20 squamous cell carcinomas, 8 small cell carcinomas, 20 adenocarcinomas, and 56 cancer samples. 1 case of cell carcinoma, 1 case of giant cell carcinoma, and 6 cases of unclassified lung cancer.
[0131] Experimental procedure:
[0132] In this example, the primer probe sequences of the nucleic acid fragments, the primer probe sequences of β-actin, and the DNA modification are the same as those in Example 1.
[0133] a. Collect sputum samples from patients diagnosed with lung cancer and patients with non-lung cancer. After thickening with NaOH, centrifuge to separate cells, wash twice with PBS, and then use Magen DNA extraction kit (HiPureFFPE). DNA Kit, D3126-03) to extract DNA.
[0134] b. The liquid dispensing system is as follows:
[0135] Table 4 dosing system
[0136]
[0137] c. The...
Embodiment 3
[0149] Example 3: Detection in lavage fluid
[0150] Sample information: A total of 176 samples of bronchoalveolar lavage fluid were tested, including 94 samples from the normal control group, 82 samples from the cancer group, 20 samples from the 82 samples from the cancer group, 20 samples from squamous cell carcinoma, 40 samples from adenocarcinoma, and 9 samples from small cell carcinoma. , 13 cases of unspecified type of lung cancer. The primer probes for each gene detection are as follows:
[0151] The detection primers and probes for nucleic acid fragments are:
[0152] SEQ ID NO: 1 Primer F: TCGTGTGTCGTCGTTCAGAC
[0153] SEQ ID NO: 2 Primer R: GAAATACCCGCGAAAATACTG
[0154] SEQ ID NO: 3 Probe P: FAM-AGTTTTACGTTGGAGAAGCGTCGG-BQ1
[0155] The detection primers and probes for β-actin are:
[0156] SEQ ID NO: 6β-actin Primer F: GGAGGTTTAGTAAGTTTTTTGGATT
[0157] SEQ ID NO: 7β-actin primer R: CAATAAAACCTACTCCTCCCTTA
[0158] SEQ ID NO: 8β-actin probe P: Texas Red-TTGT...
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