Chlorophyll katabolism control associated protein of non-heading Chinese cabbage as well as encoding gene and application thereof
A technology for chlorophyll degradation and metabolism regulation, applied in non-heading Chinese cabbage chlorophyll degradation metabolism regulation related proteins and their coding genes and applications question
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Embodiment 1
[0023] Example 1, non-heading Chinese cabbage chlorophyll degradation metabolism regulation related protein coding genes BcNYE1 obtained.
[0024] 1.1 RNA extraction
[0025] Take about 0.1 g of aged non-heading Chinese cabbage leaf material. After the liquid nitrogen is fully ground, transfer to a 1.5ml centrifuge tube, add 1ml (Invitrogen Company), after mixing, place at room temperature for 15 minutes, add 0.2ml of chloroform:isoamyl alcohol (24:1), shake vigorously for 15 seconds, place at room temperature for 5 minutes, centrifuge at 13000rpm, 4°C for 15 minutes. Take the supernatant and add an equal volume of isopropanol, mix carefully, place at room temperature for 15 minutes, centrifuge at 13000 rpm, 4°C for 15 minutes. The precipitate was washed with 70% ethanol and dried at room temperature for 15 minutes. Dissolve in an appropriate amount of ddH treated with 0.1% DEPC 2 O water, stored at -80°C for later use.
[0026] 1.2 cDNA first-strand synthesis and rev...
Embodiment 2
[0047] Example 2: Functional analysis of proteins related to regulation of chlorophyll degradation in non-heading Chinese cabbage.
[0048] 2.1 Sequence comparison analysis
[0049] The homology of BcNYE1 with other species was analyzed by Genedoc software. The analysis results showed that BcNYE1 had great homology with NYE1 proteins of other species. SbSGR (sorghum, AAW82958), ZmSGR1 (maize, NP_001105770), ZmSGR2 (maize, NP_001105771), OsSGR (rice, EAZ09856), HvSGR (barley, AAW82955), AtNYE1 (Arabidopsis, NP_567673), AtNYE2 (Arabidopsis, ABD77556), LeSGR1 (tomato, AAY98500), GmSGR1 (soybean AAW82959), PsSGR (pea, BAF76352).
[0050] In order to analyze the relationship between BcNYE1 and NYE proteins of other species, the phylogenetic tree of BcNYE1 and NYE proteins of other species was established by using MEGA software. The results showed that BcNYE1 had the closest relationship with AtNYE1. The sequence accession numbers of the NYE proteins of each species in the phylo...
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