Polymerase chain reaction (PCR) amplification buffer solution for high-GC-content genes, and amplification method and application of PCR amplification buffer solution
A buffer and content technology, applied in the field of bioengineering, can solve the problems of small specificity and low chance of target bands, and achieve the effects of enhanced PCR amplification, bright bands, and reduced formation of DNA secondary structures.
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[0030] PCR amplification of NKX3.1 gene ORF
[0031] The full-length ORF of NKX3.1 gene is 705bp, and the GC content is as high as 80% in the first 200 bases, which is a typical local high GC content gene.
[0032] 1. Template preparation
[0033] Using a commercially available genomic DNA extraction kit, the concentration of extracted DNA is 100 ng / μl, the 260 / 230 value is greater than 2.0, and the 260 / 280 value is greater than 1.8.
[0034] 2. Primer design
[0035] According to the NKX3.1 gene sequence, use Oligo6.0 software to design primers as follows:
[0036] Upstream primer: 5'-CGACCTGTCACCGCCCTTCAG-3'
[0037] Downstream primer: 5'-AGCCCCGCACTTCCACCACC-3'
[0038] 3. PCR reaction
[0039] PCR amplification system 1:
[0040] 10×Buffer, 5 μl; dNTPs (2.5mmol / L) 4 μl; upstream primer (10 μmol / L) 1 μl; downstream primer (10 μmol / L) 1 μl; DNA 300ng; DNA polymerase (2.5U / μl) 2 μl; ddH 2 O to make up to 50 μl.
[0041] PCR amplification system 2:
[0042] 10×Buffer,...
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