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The method of SNP typing by direct PCR of oral swab

An oral and swab technology, applied in the field of SNP typing, can solve the problems of expense, high cost, and a lot of time

Active Publication Date: 2021-10-29
美因健康科技(北京)有限公司
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Whether it is a silica membrane column centrifugal kit or a magnetic bead method kit, a lot of time is required and the cost is high
In addition to the cost of the kit, there are special requirements for laboratory equipment. The automated workstation used in the magnetic bead method is a very typical large-scale high-value equipment, which is a huge expense for the laboratory.

Method used

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  • The method of SNP typing by direct PCR of oral swab
  • The method of SNP typing by direct PCR of oral swab
  • The method of SNP typing by direct PCR of oral swab

Examples

Experimental program
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Effect test

Embodiment 1

[0050] A method for performing SNP typing by direct PCR of oral swabs, comprising the following steps: rough processing of oral swabs, obtaining diluted samples—PCR amplification—SNP typing identification; strong tolerance is used in the PCR amplification. Sexual DNA polymerase.

[0051] The rough treatment method of the buccal swab is to add 200 μl of cell lysate to the buccal swab storage tube and then lyse at room temperature for 10 minutes; The supernatant was put into a 96-well plate; the dilution refers to diluting the cell solution 5 times with distilled water to obtain a diluted sample. Beginning with lysis, followed by removal of epidermal cells by centrifugation, and finally by 5-fold dilution, a sample that can be used for PCR was obtained through these operations. During this process, we did not use any additional reagents or instruments, and completed it in the simplest way. This pretreatment process is the first of its kind in this application.

[0052] The str...

Embodiment 2

[0069] A method for performing SNP typing by direct PCR of oral swabs, comprising the following steps: rough processing of oral swabs, obtaining diluted samples—PCR amplification—SNP typing identification; strong tolerance is used in the PCR amplification. Sexual DNA polymerase.

[0070] The rough treatment method of the buccal swab is to add 200 μl of cell lysate to the buccal swab storage tube and then lyse at room temperature for 10 minutes; The supernatant was put into a 96-well plate; the dilution refers to diluting the cell solution 5 times with distilled water to obtain a diluted sample. Beginning with lysis, followed by removal of epidermal cells by centrifugation, and finally by 5-fold dilution, a sample that can be used for PCR was obtained through these operations. During this process, we did not use any additional reagents or instruments, and completed it in the simplest way. This pretreatment process is the first of its kind in this application.

[0071] The str...

Embodiment 3

[0088] A method for performing SNP typing by direct PCR of oral swabs, comprising the following steps: rough processing of oral swabs, obtaining diluted samples—PCR amplification—SNP typing identification; strong tolerance is used in the PCR amplification. Sexual DNA polymerase.

[0089] The rough treatment method of the buccal swab is to add 200 μl of cell lysate to the buccal swab storage tube and then lyse at room temperature for 10 minutes; The supernatant was put into a 96-well plate; the dilution refers to diluting the cell solution 5 times with distilled water to obtain a diluted sample. Beginning with lysis, followed by removal of epidermal cells by centrifugation, and finally by 5-fold dilution, a sample that can be used for PCR was obtained through these operations. During this process, we did not use any additional reagents or instruments, and completed it in the simplest way. This pretreatment process is the first of its kind in this application.

[0090] The str...

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Abstract

The invention provides a method for SNP typing by direct PCR of oral swabs, comprising the following steps: rough processing of oral swabs, preparation of diluted samples—PCR amplification—SNP typing identification. The method of the present invention directly performs SNP typing by PCR, which saves the step of extracting DNA.

Description

technical field [0001] The invention relates to a SNP typing method, in particular to a method for performing SNP typing by direct PCR of oral swabs. Background technique [0002] SNPs (Single Nucleotide Polymorphisms) are nucleic acid sequence polymorphisms caused by changes in a single nucleotide. The frequency of SNPs in the human genome is relatively high, with an average of one polymorphic site in every 1000 bases. Some SNP sites can also affect the function of genes, leading to changes in biological traits and even disease. Single nucleotide polymorphisms are an important basis for the study of genetic variation in human families and animal and plant strains, so they are widely used in population genetics research (such as the origin, evolution, and migration of organisms) and disease-related genes. It plays an important role in pharmacogenomics, diagnostics and biomedical research. [0003] Among the technologies currently involved in the detection of SNPs, DNA is ...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/6858
CPCC12Q1/6858C12Q2531/113C12Q2521/101C12Q2527/107
Inventor 刘书杰肖哲焦少灼戚珠云宫夏霓
Owner 美因健康科技(北京)有限公司