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A method for shortening agarose gel electrophoresis staining

An agarose gel and agarose technology, which is applied in the field of biochemical experiments, can solve the problems of difficult degradation, transformation and purification, cumbersome, harmful, toxic and other problems, and achieves an effect that is beneficial to observation.

Inactive Publication Date: 2020-07-28
江西省农业科学院水稻研究所
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, it has strong toxicity, strong mutagenicity, moderate carcinogenicity, difficult to degrade and transform, and cumbersome purification treatment, which poses great harm to experimenters and the surrounding environment.

Method used

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  • A method for shortening agarose gel electrophoresis staining
  • A method for shortening agarose gel electrophoresis staining
  • A method for shortening agarose gel electrophoresis staining

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Experimental program
Comparison scheme
Effect test

Embodiment 1

[0032] Such as figure 1 Shown is the gel electrophoresis image extracted by the method of the present invention.

[0033] A method for shortening the staining of agarose gel electrophoresis, which comprises: cleaning and drying the graduated cylinder, the triangular flask, the gel plate, and the tooth sample lattice, sealing the both sides of the opening of the gel plate with adhesive tape, and Place the gel tray on a horizontal table, insert the tooth sample grid, and use the graduated cylinder to measure the TBE electrophoresis buffer.

[0034] Since the tooth sample grid has a flat opening on one side and a notch on the other side, it is a complementary design to the gel tray. When inserting, you need to pay attention to the left and right directions.

[0035] Preparation of agarose gel

[0036]

[0037] Use a measuring cylinder to measure 40mL of 5×TBE electrophoresis buffer, add water to 200mL, configure 1×TBE to dilute the electrophoresis buffer and pour it into a c...

Embodiment 2

[0047]Example 2. Prior art traditional EB added directly to the gel

[0048] EB-stained gel electrophoresis was figure 2 .

[0049] Preparation of DNA Molecular Weight Ladders

[0050] The lambda DNA fragment obtained by EcoR I or Hind III enzyme was used as the molecular weight standard during electrophoresis. λDNA is a double-stranded DNA molecule with a length of about 50kb. The concentration of its commercial solution is 0.5mg / mL. The enzymatic hydrolysis operation is as follows:

[0051] HindⅢ cut DNA to obtain 8 fragments, the lengths were 23.1, 9.4, 6.6, 4.4, 2.3, 2.0, 0.56 and 0.12kb.

[0052] After cutting IDNA with EcoRI, six fragments were obtained, the lengths of which were 21.2, 7.4, 5.8, 5.6, 4.9 and 2.5kb.

[0053] Preparation of agarose gel

[0054] Take 20mL of 5×TBE buffer and add water to 200mL to prepare 0.5×TBE dilution buffer for use.

[0055] Preparation of glue solution: Weigh 0.4g agarose, put it in a 200mL conical flask, add 0.5×TBE dilution bu...

Embodiment 3

[0065] Example 3. Prior art improved nucleic acid agarose gel electrophoresis EB staining method

[0066] Improved nucleic acid agarose gel electrophoresis such as image 3 shown.

[0067] Dissolve 1g of agarose in 100mL of TAE buffer, heat it in a microwave oven, and when it cools down to about 50°C, add 5uLEB stock solution to the agarose gel to prepare a piece of 1% agarose gel without EB. 5uL EB stock solution was recorded as EBO in 95uL distilled water, and then 1uL was taken out of it and added to 1mL of bromophenol blue to mix, which was recorded as EBO1. When loading the sample, the former directly takes 5uL of the PCR product and 3uL of bromophenol blue without EB and mixes the sample, while the latter fully mixes 5uL of the PCR product and 3uL of bromophenol blue (EBO1) containing EB and loads the sample, both under the same conditions Perform electrophoresis, electrophoresis at 100V for 15min, and detect the brightness of the bands under ultraviolet light.

[006...

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Abstract

The invention relates to a method for shortening agarose gel electrophoresis staining, and belongs to the technical field of biochemical experiments. The method comprises the following steps: mountinga gel plate, preparing an agarose gel, filling with the agarose gel, adding a sample, observing and the like, a novel nucleic acid staining GelRed reagent (Biotium) is used, and an EB staining step is omitted. By the method, operation is simple, convenient, and easy to master, an experimental result is clear in stripe, reagents in the experimental process are non-toxic and low in mutagenicity, the tape dyeing effect and the time efficiency are improved, and the health of an operator and the safety of an experimental environment are guaranteed.

Description

technical field [0001] The invention belongs to the technical field of biochemical experiments, and in particular relates to a method for shortening agarose gel electrophoresis staining. Background technique [0002] In recent years, molecular biology has developed rapidly, and polymerase chain reaction (PCR) is a simple and accurate nucleic acid quantitative detection technology. Agarose gel electrophoresis is a standard method for separating, identifying and purifying DNA fragments, and is one of the core techniques of molecular biology. Agarose is a polysaccharide extracted from agar, which is hydrophilic but uncharged, and is a good electrophoretic support. DNA is negatively charged under alkaline conditions (pH8.0 buffer), and moves to the positive electrode through the gel medium in the electric field. Different DNA molecular fragments have different swimming rates in the electric field due to their different molecules and configurations. Ethidium Bromide (EB) can be...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): G01N27/447G01N1/30
CPCG01N1/30G01N27/447G01N2001/302
Inventor 胡标林吴小燕李霞罗世友
Owner 江西省农业科学院水稻研究所