DNA barcode, primer, kit, method and application
A barcode and primer pair technology, applied in the field of primers, kits, and DNA barcodes, can solve the problems of lack of Pu'er tea, damage to the economic interests of Pu'er tea production enterprises, etc. The effect of efficiency
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Embodiment 1
[0073] Example 1: Obtaining of BS1R_4124891 gene and DNA barcode
[0074] 1. Using the high-coverage proteome technology, pFind and pAnno software were used to conduct a deep coverage study on the proteome of the Pu-erh tea industrial fermentation fungus Arthrospora adenorivorum TMCC 70007, and to verify the annotated coding genes of its genome, and found that The annotated gene BS1R_4124891 was eliminated. In order to discover new protein coding regions, using the Six Frame Translation strategy in systematic proteomics, a six-frame translation database of the genome data of Arthrospora adenophagous TMCC70007 was obtained, and the six codings of the genome were exhaustively listed. Possibly (+1, +2, +3, -1, -2, -3), and the nucleic acid sequence is called "six-frame translated nucleic acid sequence", and the protein sequence is called "six-frame translated protein sequence". Generally speaking, a six-frame translated nucleic acid sequence is the sequence from one terminator t...
Embodiment 2
[0098] Example 2. Identification of bacterial strains using DNA barcodes
[0099] According to the amplification result of the sample to be tested and the sequence homology with Arthrospora adenophagous TMCC 70007 strain SEQ ID NO.1, it is determined whether the sample to be tested is the industrially applied strain of Arthrospora adenorivorum TMCC 70007 .
[0100] (1) Source of strain
[0101] Table 4 Information about the relevant strains selected
[0102] Sample serial number
scientific name
Strain number
1
Arthrospora adenophagous
TMCC 70007
Puer Tea Wodui, China
2
Arthrospora adenophagous
CBS 8244 T
soil, netherlands
3
Arthrospora adenophagous
CBS 7350
Cellar corn feed, Netherlands
4
Arthrospora adenophagous
CBS 7370
soil, south africa
5
Arthrospora adenophagous
CBS 8335
clay, italy
6
Blastobotrys raffinosifermentans
CBS 6800 T
unk...
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