DNA molecular weight standard suitable for brittle X syndrome southern blot hybridization detection
A technology of molecular weight standards and syndromes, applied in the field of molecular biology, can solve problems such as lack of accuracy, difficulty in judging genotype, difficulty in result analysis, etc., and achieve the effect of accurate and rapid judgment
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Embodiment 1
[0050] The preparation of embodiment 1 DNA molecular weight standard
[0051] 1. Obtain recombinant plasmids of DNA fragments
[0052] Six DNA sequences containing probe sequences were designed and synthesized by Sangon Bioengineering (Shanghai) Co., Ltd. Its sequence nucleotides are as shown in SEQ ID NO: 1~6 (all do not contain the enzyme cutting site of EagI or EcoRI), the southern blot blot blot hybridization that contains on each fragment is combined with the probe sequence of FMR1 gene (its sequence core The nucleotide is shown in SEQ ID NO: 13), Figure 1-6 Probe sequences are shown in bold.
[0053] The synthetic sequence was inserted into the LacZα region of the pEASY-T1 vector.
[0054] The six plasmids were respectively transformed into E. coli strains to obtain six recombinant E. coli strains B28, B29, B33, B52, B53 and B57. Escherichia coli was cultured, and the recombinant plasmids ZM28, ZM29, ZM33, ZM52, ZM53 and ZM57 were extracted respectively.
[0055] 2...
Embodiment 2
[0077] The agarose gel electrophoresis of embodiment 2 DNA molecular weight standard
[0078] 1. Experimental method
[0079] Use the DNA molecular weight standard prepared in Example 1 for southern blot hybridization to perform 1% agarose gel electrophoresis, and the following samples were electrophoresed at the same time: 15000bp DNA ladder (product number: 3582A), 2000bp DNA ladder (product number: 3427A), 200bp DNA ladder (Product No.: 3423A), 1kb DNA ladder (Product No.: 3426A), 5 μL of each of the 4 kinds of ladders were purchased from Baoriji Pharmaceutical Co., Ltd.; Southern blot hybridization DNA molecular weight standard 50 μL. Under the condition of 40V voltage and 2-8℃, run for 26h.
[0080] 2. Experimental results
[0081] Observe the electrophoresis results under gel imaging, and compare the electrophoresis bands of the 6 fragments in the prepared southern blotting hybridization DNA molecular weight standard with the bands of the above 4 kinds of ladders, and ...
Embodiment 3
[0082] Example 3 Southern blot hybridization verification of DNA molecular weight standards
[0083] 1. Experimental method
[0084] Use the DNA molecular weight standard prepared in Example 1 for Southern blot hybridization detection. The specific steps are: prepare 1% agarose gel, add 5 μL of 1 kb DNA ladder, and 15 μL of the DNA molecular weight standard prepared in Example 1. , under 40V voltage, 2~8 ℃ of conditions, electrophoresis 27h; After electrophoresis finishes, carry out denaturation transfer membrane 16~20h, then add southern blot hybridization probe (preparation method is the same as embodiment 1, and its nucleotide sequence is as SEQ ID NO: 16) for overnight hybridization, and finally for chemical color development.
[0085] 2. Experimental results
[0086] The result shows as Figure 8 As shown, the 6 fragment bands in the prepared southern blotting hybridization DNA molecular weight standard were normal in color, and the above fragments were compared with t...
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