Method for isothermal amplification of nucleic acid target sequence
An isothermal amplification and nucleic acid target technology, which is applied in the field of thermal amplification of nucleic acid target sequences, can solve problems such as false positives, incorrect reaction, unreasonable product analysis, etc., and achieve the effect of ensuring specificity
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Embodiment 1
[0086] The detection of the plasmid that embodiment 1 carries human gene PSMB2
[0087] The primer probe sequence (5'-3') is as follows:
[0088] PSMB2-B (primer): CCCAGCACTTT
[0089] PSMB2-F (primer): TTCAGACTATTGAGTCTATTCTGACCAACAT
[0090] PSMB2-R (primer): GTCAGACTATTGAGTCTTCTCCCAGCTAAT
[0091] PSMB2-P (probe): ATGGTAGTAGAGACGGGGTTTTTACCAT
[0092] The reaction system (final concentration of each component) is as follows:
[0093] Tris-HCl pH8.0, 50mM
[0094] (NH4) 2 SO 4 , 20mM
[0095] MgCl 2 , 10mM
[0096] NaCl, 30mM
[0097] KCl, 10mM
[0098] dNTPs, 1mM
[0099] Betaine, 0.5M
[0100] PSMB2-B, 200mM
[0101] PSMB2-F, 300mM
[0102] PSMB2-R, 300mM
[0103] PSMB2-P, 300mM
[0104] Nt.BstNBI, 3U
[0105] Bst 2.0 warmstart, 4.8U
[0106] The reaction was carried out at 55 ° C, and the signal was collected every 10 s, and the instrument was LightCycler 480II. Detect plasmids 1E5, 1E4, 1E3, 1E2, 1E1 and no template control, the results are as follows...
Embodiment 2
[0107] Example 2 Mycoplasma pneumoniae clinical sample detection
[0108] The primer probe sequence (5'-3') is as follows:
[0109] Mp-B (primer): CTCTCCACTAA
[0110] Mp-F (primer): CATAGACTTATGAGTCTTCTATTCGCTTC
[0111] Mp-R (primer): GTTAGACTTTTGAGTCTTCTTGCTCTGGT
[0112] Mp-P (probe): CGCAGCTGGTTACGGGAATACTGCG
[0113] The reaction system (final concentration of each component) is as follows:
[0114] Tris-HCl pH8.0, 50mM
[0115] (NH4) 2 SO 4 , 20mM
[0116] MgCl 2 , 8mM
[0117] NaCl, 30mM
[0118] KCl, 10mM
[0119] dNTPs, 1mM
[0120] Betaine, 0.5M
[0121] Mp-B (primer), 200mM
[0122] Mp-F (primer), 400mM
[0123] Mp-R (primer), 400mM
[0124] Mp-P (probe), 300mM
[0125] Nt.BstNBI, 3U
[0126] Bst 2.0 warmstart, 4.8U
[0127] The reaction was carried out at 55 ° C, and the signal was collected every 10 s, and the instrument was LightCycler 480II. Detected 8 cases of lung branch samples, the results are as follows Figure 5 As shown, all 8 cases ...
Embodiment 3
[0129] Example 3 Influenza B virus (single-stranded RNA virus) clinical sample detection
[0130] The primer probe sequence (5'-3') is as follows:
[0131] FluB-B (primer): TGTTGCTAAACT
[0132] FluB-F (primer): CTACTGATGAGTCTTTTTAGTGGAGG A T
[0133] FluB-R (primer): CCTTCATTGAGTCTTTTGAAG A GTGA
[0134] FluB-P (probe): ACGGCCATCGGATCCTCAAGCCGT
[0135] Note:" A " Modified with LNA.
[0136] The reaction system (final concentration of each component) is as follows:
[0137] Tris-HCl pH8.0, 50mM
[0138] (NH4) 2 SO 4 , 20mM
[0139] MgCl 2 , 8mM
[0140] NaCl, 30mM
[0141] KCl, 10mM
[0142] dNTPs, 1mM
[0143] Betaine, 0.5M
[0144] FluB-B (primer), 200mM
[0145] FluB-F (primer), 400mM
[0146] FluB-R (primer), 400mM
[0147] FluB-P (probe), 300mM
[0148] Nt.BstNBI, 3U
[0149] Bst 3.0, 6U
[0150] The reaction was carried out at 55 ° C, and the signal was collected every 10 s, and the instrument was LightCycler 480II. Detect 8 clinical samples of i...
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