Anti-melanoma cytotoxic lymphocyte (CTL) multi-epitope peptide and application thereof
An anti-melanoma and melanoma technology, applied in the field of medical biology, can solve the problems of difficult preparation, high cost of anti-melanoma peptide vaccines, and strong immune stimulation.
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Embodiment 1
[0036] Example 1: Design and construction of CTL multi-epitope peptides
[0037] The purchased CTL multi-epitope peptides included 3 CTL epitopes, a Th universal epitope and 5 linkers. The three epitopes are CTL epitopes restricted by MHC class I molecules highly expressed on HCC, and they are:
[0038] MAGE-3 (271-279) FLWGPRALV (SEQ ID NO: 1),
[0039] AFP (542-550) GVALQTMKL (SEQ ID NO: 2)
[0040] MAGE-1 (278-286) KVLEYVIKV (SEQ ID NO: 3).
[0041] Then, according to computer-aided design optimization, each epitope and linker sequence are arranged in a beaded aggregation sequence. The principle guarantee is that each epitope is spaced with a suitable linker sequence to maintain the spatial conformation of each epitope without interfering with each other.
[0042] The amino acid sequence of the finally determined CTL multi-epitope peptide, the order from 5' to 3' is:
[0043] GAA-FLWGPRALV-NAAA-KVLEYVIKV-KAA-PADRE-GAAA
[0044] GVALQTMKL-GAA
[0045] Among them, FL...
Embodiment 2
[0051] Example 2: HLA-A*0201 affinity analysis of candidate peptides
[0052] MAGE-3 was synthesized separately (271-279) FLWGPRALV, AFP (542-550) GVALQTMKL and MAGE-1 (278-286) KVLEYVIKV 3 epitope polypeptides, the combination of polypeptides and HLA-A*0201 molecules was detected by immunofluorescence method. Using the fluorescence coefficient (FI) as the detection index of affinity, it was found that the three epitope peptides of the polypeptide HCC have high affinity with HLA-A*0201 molecules, see image 3 .
Embodiment 3
[0053] Example 3: Obtaining of HBc(1-75aa)-multi-epitope-HBc(75-144aa) chimeric gene sequence
[0054] At first with the DNA sequence of the epitope polypeptide of the present invention and the HBV (adr subtype) genomic DNA of whole gene synthesis respectively as template, amplify multi-epitope and HBc (1-75aa) (SEQ ID NO: 6) and HBc (75-144aa) (SEQ ID NO: 7) gene fragments, and then these three fragments are connected by PCR method to form a HBC (1-75aa)-multi-epitope-HBc (75-144aa) chimeric gene. Specific steps are as follows:
[0055] (1) Use primer P5 and primer P6 to amplify all genes encoding the multi-epitope sequence. Wherein primer P5 is: 5′-CGG GGCGCC TTTATGAACAAATTTATTTATG-3', the primer is consistent with the 5' end of the multi-epitope coding sequence, and simultaneously introduces a Bbe I restriction endonuclease site. Primer P6: 5′-GCG GAGCTC CGCCGCGCCCACCAG-3', introduces a Sac I restriction endonuclease site. PCR reactions were performed using high-fid...
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