Proteases with modified pre-pro regions
A technology of protease and serine protease, applied in hydrolytic enzymes, organic chemistry, biochemical equipment and methods, etc.
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Embodiment 1
[0132] Construction of Targeted ISD (Insertion Substitution Deletion) Library
[0133] The method (ISD method) used to construct a library of modified FNA polynucleotides is shown in FIG. 2 . Using two sets of oligonucleotides that evenly cover the sequence of the FNA gene encoding the prepro region (SEQ ID NO: 7) of the full-length protein (SEQ ID NO: 1) of 392 amino acids in forward and reverse directions, the encoding Left and right fragments of the FNA gene portion of the prepro region of FNA. Both PCR reactions (left and right fragments) contained 5'forward or 3'reverse gene sequence flanking oligonucleotides, each oligonucleotide combined with the corresponding opposing primer oligonucleotide. The fragment on the left was amplified using a single forward primer (P3233, TTATTGTCTCATGAGCGGATAC; SEQ ID NO: 123) containing an EcoRI site and reverse primers P3301r-P3404r (SEQ ID NOS: 124-227; Table 1) each containing an Eam104I site . A single reverse primer containing a M...
Embodiment 2
[0170] Generation of mutated prepro polypeptides comprising combinations of mutations by ISD
[0171] To determine the effect of combining at least 2 mutations in the prepro FNA sequence, the combinations of mutations listed in Table 3 were generated as follows.
[0172] Using the pAC-FNA10 plasmid DNA containing the mutations in Table 3 as a template, extension PCR was performed to add another mutation also selected from the mutations described in Table 3. Two PCR reactions (left and right fragments) contained 5'forward or 3'reverse gene sequence flanking oligonucleotides, each combined with a corresponding opposing primer oligonucleotide. A single forward primer (P3234, ACCCAACTGATCTTCAGCATC; SEQ ID NO: 411 ) and a reverse primer for the specific mutations shown in Table 4 were used to amplify the fragment on the left. The right fragment was amplified using a single reverse primer (P3242, ACCGTCAGCACCGAGAACTT; SEQ ID NO: 412) and a forward primer for the specific mutations ...
Embodiment 3
[0193] Site evaluation libraries (SELs) were constructed to generate position libraries at each position comprising the first 103 amino acid positions of the FNA prepro region. Site saturation mutagenesis of the prepro sequence of the full-length FNA protease was performed to identify amino acid substitutions that increase FNA production by bacterial host cells.
[0194] SEL library construction
[0195] Prepro-FNA SELs were generated using DNA 2.0 (Menlo Park, CA) using technology platforms for gene optimization, gene synthesis, and library construction under proprietary DNA 2.0 know-how and / or intellectual property. 将包含全长FNA多核苷酸(GTGAGAAGCAAAAAATTGTGGATCAGTTTGCTGTTTGCTTTAGCGTTAATCTTTACGATGGCGTTCGGCAGCACATCCAGCGCGCAGGCGGCAGGGAAATCAAACGGGGAAAAGAAATATATTGTCGGGTTTAAACAGACAATGAGCACGATGAGCGCCGCTAAGAAGAAAGATGTCATTTCTGAAAAAGGCGGGAAAGTGCAAAAGCAATTCAAATATGTAGACGCAGCTTCAGCTACATTAAACGAAAAAGCTGTAAAAGAATTGAAAAAAGACCCGAGCGTCGCTTACGTTGAAGAAGATCACGTAGCACACGCGTACGCGCAGTCCGTGCCTTACGGCGTATCACAAAT...
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