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Primer pair combination and kit for detecting and identifying human tissue echinococcosis pathogen

A primer pair and identification technology, applied in the field of disease diagnosis, can solve the problems of poor specificity, easy to produce interference reactions, and difficult primer design.

Active Publication Date: 2021-03-30
四川省疾病预防控制中心
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, on the one hand, the existing multiplex PCR methods are not completely aimed at the three human echinococcosis pathogens found in my country (E. granulosus sensu stricto, E. Echinococcus G6–G10 type E. canadensis), which cannot meet the needs of detection and identification of human echinococcosis pathogens; Many pairs of primers are easy to cross-react with closely related pathogens, resulting in false positive results, and complementary binding between primer pairs is easy to occur, and interference reactions are easy to occur. Therefore, the existing multiplex PCR method for echinococcosis has specificity. Poor performance, unreliable methods, etc.

Method used

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  • Primer pair combination and kit for detecting and identifying human tissue echinococcosis pathogen
  • Primer pair combination and kit for detecting and identifying human tissue echinococcosis pathogen
  • Primer pair combination and kit for detecting and identifying human tissue echinococcosis pathogen

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Experimental program
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Effect test

Embodiment 1

[0050] Embodiment 1 specificity experiment

[0051] Design 3 groups of experiments altogether to investigate the technical detection of the present invention and the specificity of identification echinococcosis pathogen, 3 groups of experiments are respectively:

[0052] 1, 3 pairs of mixed primers of the present invention carry out the specificity experiment of amplifying the DNA template of three kinds of purpose Echinococcus respectively;

[0053] 2, 3 pairs of mixed primers of the present invention carry out the specificity experiment that the DNA mixed template of three kinds of purpose echinococcus is amplified;

[0054] 3. The three pairs of mixed primers of the present invention are respectively used for the specificity experiment of amplifying the DNA templates of three kinds of Echinococcus and other 8 kinds of closely related cestodes.

[0055] The specific operation is as described in the aforementioned experimental method, and the electrophoresis results can be f...

Embodiment 2

[0060] Embodiment 2 Sensitivity experiment

[0061] Three kinds of Echinococcus DNA were used as templates, and the final template concentrations were: 0.7ng / μl, 0.35ng / μl, 0.18ng / μl, 0.09ng / μl, 0.04ng / μl, 0.02ng / μl, 0.01ng / μl, 0.005ng / μl, amplified according to the aforementioned experimental method.

[0062] Electrophoresis results such as Figure 4 As shown, the template of lanes 1-8 is Echinococcus granulosus G1-G3, the template of lanes 9-16 is Echinococcus multilocularis, and the template of lanes 17-24 is Echinococcus granulosus G6–G10. The final template concentrations in the reaction system were 0.7ng / μl, 0.35ng / μl, 0.18ng / μl, 0.09ng / μl, 0.04ng / μl, 0.02ng / μl, 0.01ng / μl, 0.005ng / μl. The detection limits of the present invention to the DNA of three kinds of insect species are all higher than 0.005ng / μl, indicating that the present invention has very high sensitivity.

Embodiment 3

[0063] Example 3 Application to detection of human lesion tissue samples

[0064] Selected 10 surgical patients to send liver lesion tissue for detection of Echinococcus infection. The DNA extraction and multiplex PCR amplification of the patient to be tested were carried out according to the aforementioned experimental method.

[0065] The amplified band sizes of Echinococcus granulosus G1-G3 type, Echinococcus multilocularis, and Echinococcus granulosus G6-G10 type are 240bp, 152bp and 441bp respectively, and the electrophoresis results are as follows Figure 5 As shown, wherein: lanes 1-10 are the PCR results of samples; lane 11 is the positive control, that is, the PCR amplification results of mixed DNA templates of 3 species of insects and 3 pairs of mixed primers; lane 12 is the negative control; M is the DNA molecular weight Standard marker II.

[0066] The bands in lanes 1, 3, 7, and 10 are 240bp, so the corresponding patient is positive for Echinococcus granulosus G...

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Abstract

The invention discloses a multiple PCR method for simultaneously detecting and identifying three human tissue echinococcosis pathogens, including echinococcus granulosus G1-G3, echinococcus multilocularis and echinococcus granulosus G6-G10. According to the invention, 3 pairs of specific primers are designed for the mitochondrial genes of 3 pathogens; the specific primers are added into a same PCR reaction system; the specific primers are complementarily combined with the target genes of the corresponding parasite species; through amplified reaction, different parasite species can generate target stripes in different sizes; gel electrophoresis is adopted for separating and detecting. The three pairs of primers according to the invention are free from mutual interference and have no cross reaction with 8 tapeworms in close genetic relationship or do not interfere with the result judgment. The method is high in specificity and sensitivity, can effectively and accurately realize the synchronous detection for 3 pathogens, can greatly save the detection time and cost, can effectively increase the working efficiency and can be applied to the research on the parting identification for human echinococcosis pathogens and echinococcosis molecular epidemiology.

Description

technical field [0001] The invention belongs to the field of disease diagnosis, and in particular relates to a primer pair combination and a kit for detecting and identifying various human tissue echinococcosis pathogens. Background technique [0002] Hydatidosis, commonly known as echinococcosis, is a zoonotic parasitic disease caused by the larvae of Echinococcus tapeworms parasitic in the human body. Echinococcus genus found in the world in the past is divided into 6 species, namely Echinococcus granulosus (Echinococcus granulosus), Echinococcus multilocularis (Echinococcus multilocularis), Echinococcus vogeli (Echinococcus vogeli), Echinococcus oligonodes (Echinococcus oligarthus), Echinococcus felids and Echinococcus shiquicus (Echinococcus shiquicus), among which E. granulosus (E. granulosus) is divided into 10 genotypes according to genotype, that is, Echinococcus granulosus G1-G10 type. With the application and development of molecular biology techniques in the stud...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/6888C12Q1/686C12N15/11
CPCC12Q1/686C12Q1/6888C12Q2600/16C12Q2537/143C12Q2565/125
Inventor 陈凡王谦钟波刘磊黄燕李调英
Owner 四川省疾病预防控制中心
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