SSR primer and method for identifying purity of hybrid seeds of Zaojia Luffa cylindrica
A technology for the purity and identification method of hybrid seeds, which is applied in the field of molecular detection, can solve the problems of cumbersome operations, cumbersome operation steps, and large area in the dyeing and color development steps of silver staining, and achieves high commercial application value and improves identification efficiency. , the effect of low cost
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Embodiment 1
[0027] Example 1 is used for the screening of Zaojia loofah hybrid purity identification primer
[0028] According to the SSR primers of wax gourd genome, and using the genomic DNA of Zaojia loofah female parent 'S1' and male parent 'S2' as templates for primer screening, the marker S32 with a co-dominant band was obtained, and the corresponding primer pairs were SF32 and SR32, respectively. in
[0029] The nucleotide sequence of the upstream primer SF32 is: 5'-CATCACCACCACCACAACC-3' (SEQ ID NO: 1)
[0030] The nucleotide sequence of the downstream primer SR32 is: 5'-GCCACCAAAATCAGCTCTATG-3' (SEQ ID NO: 2).
[0031] The marking band is clear and repeatable. The primer pair S32 PCR amplification can produce a maternal-specific marker of about 100bp in length and a paternal-specific marker of about 80bp, such as figure 1 As shown, the 1-3 lanes in the figure are the female parent of Zaojia loofah, the 4-6 lanes are the male parent of Zaojia loofah, and the 7th lane is a hybri...
Embodiment 2
[0032] Example 2 Zaojia loofah hybrid seed purity identification method
[0033] Germinated seed hypocotyls are used as genomic DNA extraction samples in this embodiment
[0034] (1) Rapid extraction of genomic DNA from radicle roots of Zaojia loofah and its male and female parents
[0035] About 200 seeds were taken from each part of Zaojia loofah hybrid for the test, and 4-8 seeds were taken from each of the parents. After soaking the seeds for 5 hours, they were placed in a germination box lined with filter paper, kept at a constant temperature of 37°C and kept moist. About 6-7 days after germination, the hypocotyl or root tip of a single germinated seed is about 0.5 cm to 1 cm placed on a 96-well PCR plate, and its genomic DNA is extracted by rapid alkaline cooking. Put the extracted genomic DNA sample into a 96-well PCR plate, add 50 μl of 0.25 mol / L NaOH solution with a pipette gun, boil in boiling water for 3 minutes, and handle it with care to prevent boiling water fr...
Embodiment 3
[0046] Example 3 Verification of Zaojia Luffa Hybrid Purity Identification Primer
[0047] (1) Adopt the method of embodiment 2, utilize the specific primer described in embodiment 1, to 100 strains base field planting Zaojia loofah seedling stage sample detection, find 1 miscellaneous strain, purity is 99%, identification result and field identification result match. figure 2 It is the gel map of the purity identification of some Zaojia loofah hybrid seeds. The first lane in the figure is a 50bp marker, the second lane is the female parent, the third lane is the male parent, and the remaining lanes are samples to be tested.
[0048] (2) Adopt the method for embodiment 2 to sample the seeds of the Hunan Shuangfeng Seed Production Base, carry out purity identification, germinate 190 strains, adopt the simplified method to extract DNA samples and detect, the test results are all true hybrids, and the seed purity is 100%. , which is consistent with the field investigation resul...
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