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Somatic mutation hypersensitivity detection method based on nucleic acid mass spectrum platform

A nucleic acid mass spectrometry and detection method technology, which is applied in the field of ultrasensitive detection of somatic mutation based on a nucleic acid mass spectrometry platform, can solve the problems of easy pollution, long time and high cost, and achieves wide application, short detection time and low cost. Effect

Pending Publication Date: 2021-11-16
新起点生物科技苏州有限公司
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0012] The present invention mainly solves the problems that the existing gene detection technology has complex detection process, takes a long time, easily causes pollution, inaccurate detection results and high cost.

Method used

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  • Somatic mutation hypersensitivity detection method based on nucleic acid mass spectrum platform
  • Somatic mutation hypersensitivity detection method based on nucleic acid mass spectrum platform
  • Somatic mutation hypersensitivity detection method based on nucleic acid mass spectrum platform

Examples

Experimental program
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Effect test

Embodiment 1

[0073] Embodiments of the present invention provide a method based on nucleic acid mass spectrometry platform cell mutation hypermissone detection method, please refer to Figure 1 to 22 , Includes the following steps:

[0074] It is to be noted that the selected test site is L858R and T790M, and the sequence information of the design is selected by the EGFR. Image 6 Indicated.

[0075] The gene EGFR to be detected was obtained, and the sequence analysis operation was performed, i.e., the region DNA sequence of the EGFR gene was analyzed, and the mutagenection site L858R and T790M were obtained to be tested.

[0076] The reaction system of the PCR amplification probe according to the EGFR gene is designed, SAP reaction reagent, single base extension repressor and wild type repressor, and PCR amplification probes. figure 2 As shown, the reaction system of the SAP reactant is as image 3 The reaction system of the single base extension of the plasma Figure 4 As shown, the design of wi...

Embodiment 2

[0097] Embodiments of the present invention provide a method based on nucleic acid mass spectrometry platform cell mutation hypermissone detection method, please refer to Figure 1 to 5 and Figure 23 to Figure 29 , Includes the following steps:

[0098] It is to be noted that the selected test site is G12D and G13D, and the sequence information of the design is selected as the KRAS. Figure 23 Indicated.

[0099] The gene KRAS to be detected is obtained, and the sequence analysis operation is performed, that is, the region DNA sequence of the KRAS gene is analyzed, and the mutagenection point G12D and G13D to be tested are obtained.

[0100] According to the KRAS gene, the PCR amplification primer, SAP reagent, mono-base extension repressor and wild-type repressor probe, the reaction system of PCR amplification primers, based on the KRAS gene.figure 2 As shown, the reaction system of the SAP reactant is as image 3 The reaction system of the single base extension of the plasma Figure...

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Abstract

The invention discloses a somatic mutation hypersensitivity detection method based on a nucleic acid mass spectrum platform. The method comprises the following steps: obtaining a gene to be detected; performing analysis operation on the to-be-detected gene to obtain a to-be-detected mutation site; designing a PCR amplification primer, an SAP reaction reagent, a single base extension repression primer and a wild repression probe according to a mutation site to be detected; performing amplification operation on the to-be-detected gene to obtain a PCR product; performing SAP reaction operation on the PCR product to obtain a digestion product; performing extension reaction operation on the digestion product to obtain an extension product; performing sample application operation on the extension product to obtain sample application data; analyzing the sample application data to obtain the mutation type of the to-be-detected gene; through the mode, the method is lower in cost, shorter in detection time consumption, capable of flexibly designing mutation sites, ultrahigh in sensitivity, higher in mutation detection flux, capable of simultaneously detecting nearly hundreds of mutation types, wide in application range and applicable to different sample types.

Description

Technical field [0001] The present invention relates to the field of gene detection, and more particularly to a method based on nucleic acid mass spectrometry. Background technique [0002] With the continuous in-depth and development of human genomics, drug genomics and tumor molecular biology research, the mode of tumor treatment is taken by empirical guidance to the treatment of genetic orientation. [0003] Existing genetic testing technology mainly includes: [0004] Direct sequencing method, the advantage is that the cost is low, the test results are intuitive; its disadvantage is that the process is cumbersome, the time consumption is longer, and the sensitivity is limited. [0005] Pyrophosphate sequencing method, it is advantageous that no electrophoresis does not require fluorescent labeling of DNA fragments without electrophoresis, it can quickly and accurately determine a shorter target fragment; its disadvantage is that the sequencing length is shorter, and it is eas...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): G16B25/20
CPCG16B25/20G16B30/00
Inventor 叶绍云蒋峻峰杨小娟刘雨
Owner 新起点生物科技苏州有限公司
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