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Expression carrier for RNA interference research

A technology of eukaryotic expression vector and vector, applied in the field of genetic engineering, can solve the problems of low efficiency, shortened experimental period, long experimental period and so on

Inactive Publication Date: 2007-10-03
GUANGDONG GENERAL HOSPITAL
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0006] The purpose of the present invention is to solve the common problems of long experimental period and low efficiency in the current RNA interference research, and carry out promoter transformation on eukaryotic expression vectors expressing siRNA and adenovirus shuttle plasmid vectors so that they can be used in combination to prepare expression siRNA recombinant adenoviral plasmid vector to realize systematic RNAi experimental research at the cell and whole animal level, shorten the experimental cycle and improve efficiency

Method used

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  • Expression carrier for RNA interference research
  • Expression carrier for RNA interference research
  • Expression carrier for RNA interference research

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0033] Example 1 Construction of PSec-pol plasmid

[0034] According to the known mouse U6 RNA polymerase III (PolIII) promoter sequence, design synthetic PCR primers: upstream primers:

[0035] 5'-CAATGGGAGTTTGTTTTGTCTAGAACTAGTCGATCCGACGCCGCCATCTCTAG-3';

[0036] Downstream primers:

[0037] 5'-GGGGATCCAAACAAGGCTTTTCTCCAAGG-3'(BamH I), using mouse genomic DNA as a template, amplified to obtain a PolIII fragment (354bp), the nucleotide sequence of which is shown in SEQ ID NO:3.

[0038] According to the CMV enhancer sequence (CMV enhancer) of the pSec-Tag2A vector, design and synthesize PCR primers: upstream primer: 5'-GCCAGATATACGCGTT-3' (Mlu I),

[0039] Downstream primer: 5′-CGTCGGATCGACTAGTTCTAGACAAAACAAACTCCCATTG-3′; the CMV enhancer fragment (519bp) was amplified using the pSec-Tag2A vector as a template, and its nucleotide sequence is shown in SEQ ID NO:4.

[0040] Since the downstream primer of CMV enhancer and the upstream primer of PolIII are completely complement...

Embodiment 2

[0042] Example 2 Construction of pAdTrack-pol plasmid

[0043] Restriction endonuclease analysis showed that there was a single restriction endonuclease Nde I site at the upstream and downstream of the pAdTrack-CMV vector multiple cloning site. The Nde I (CATATG) site downstream of the pAdTrack-CMV multiple cloning site was mutated into CATATC by PCR mutagenesis, and only the single Nde I site upstream of the multiple cloning site was retained. At the same time, the CMV enhancer-MLC-2V fragment was prepared by the PCR amplification ligation method, and the CMV enhancer-MLC-2V fragment was replaced by the CMV enhancer and promoter of the original pAdTrack-CMV plasmid by the directional cloning method.

[0044] The specific method is as follows: according to the single HindIII and NheI sites on both sides of the downstream Nde I site of the pAdTrack-CMV vector multi-cloning site, two pairs of primers were designed to amplify the corresponding fragments respectively. The first p...

Embodiment 3

[0056] Example 3 Cytology experiment:

[0057] Using Lipofectamine2000 reagent, 3ug of pN3-EGFP plasmid DNA was transformed into human embryonic umbilical vein endothelial cells (HUVECs) with an abundance of 80%. Pressurize with 800ug / mL G418, and observe that all cells express green fluorescent protein (GFP), pressurize with 400ug / mL G418, and continue to scale up the culture.

[0058] According to the reported 22-nt siRNA sequence that can inhibit the expression of GFP, the DNA template of the siRNA targeting the GFP gene fragment GCGATGCCACCTACGGCAAGC was prepared, and the siRNA expression vector pSec-pol-GFP was constructed. Using Lipofectamine2000 reagent, pSec-pol and pSec-pol-GFP were transfected into GFP-expressing HUVECs, and 48 hours after transfection, the expression level of GFP was detected by cell image analysis system and Real-time quantitative PCR, respectively. The detection results showed that, compared with the control group, the expression levels of GFP pr...

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Abstract

The invention discloses an expression carrier for RNA interference research, reconstructing the starter sequences of eukaryotic expression carrier and adenovirus pshuttle carrier. The starter-reconstructed eukaryotic expression carrier has polIII starter, able to express siRNA in eukaryotic cell and the starter-reconstructed adenovirus pshuttle carrier has consistent starter and two side sequences. It can sub-clone destination sequence in the starter-reconstructed eukaryotic expression carrier into the starter-reconstructed adenovirus pshuttle carrier, and then prepare recombinant siRNA-expressing adenovirus plasmid carrier.

Description

technical field [0001] The invention relates to the technical field of genetic engineering, in particular to a plasmid vector for expressing siRNA. Background technique [0002] With the development of molecular biology techniques, a variety of techniques have been used to study the inhibition of gene expression, such as antisense oligonucleotides, antisense nucleic acids, ribozymes and so on. In recent years, RNA interference technology (RNA interference, RNAi) has become an effective means of post-transcriptional gene regulation and a powerful tool for gene function research. Studies have shown that the introduction of small double-stranded RNA (small linterfering RNA, siRNA) of 21-23 nucleotides in mammalian cells and even human cells can cause a specific and strong inhibitory effect on the expression of targeted genes. [0003] For RNAi research, it is necessary to screen and identify candidate siRNAs in order to obtain effective siRNAs. There are mainly five methods f...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12N15/79C12N15/861
Inventor 单志新余细勇林秋雄
Owner GUANGDONG GENERAL HOSPITAL