Method for detection of HIV-1 non-nucleoside inhibitor drug resistance mutation and kit
A HIV-1, non-nucleoside technology, applied in the detection of HIV-1 virus non-nucleoside inhibitor drug-resistant mutation method and kit field, can solve the problem of high technical requirements, lack of quality assurance of detection methods, insensitivity of small virus samples And other issues
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Embodiment 1
[0115] Embodiment 1, using the present invention to detect HIV-1 virus non-nucleoside reverse transcriptase inhibitor single-site drug-resistant mutation
[0116] In this embodiment, all HIV-1 virus non-nucleoside reverse transcriptase inhibitor drug-resistant mutation types involved in the present invention are detected, as well as wild-type HIV-1 virus reverse transcriptase gene types that do not contain any mutations.
[0117] 1. Preparation of Oligonucleotide Primers and Probes
[0118] Table 1 and Table 2 show the sequences of primers and probes used in the detection of HIV-1 virus non-nucleoside reverse transcriptase inhibitor resistance mutations according to the present invention, all of which were synthesized by Shanghai Yingjun Biotechnology Co., Ltd.
[0119] Table 1 HIV-1 viral reverse transcriptase gene segment amplification primers
[0120] Primer number
Primer sequence (5'-3')
PMV-001
gagagcttcaggtctgggg
PMV-002
CTGTTAGTGCTTTG...
Embodiment 2
[0175] Example 2: Using the present invention to detect HIV-1 virus non-nucleoside reverse transcriptase inhibitor multi-site and low-abundance drug-resistant mutations
[0176] This example illustrates that the method and kit provided by the present invention can simultaneously detect samples containing multiple HIV-1 virus non-nucleoside reverse transcriptase inhibitor resistance mutations.
[0177] This example also shows that the method provided by the present invention can detect drug-resistant mutations with an abundance as low as 2% contained in the sample, and is a method with extremely high sensitivity.
[0178] 1. The preparation method and steps of oligonucleotide primers and probes are the same as in Example 1.
[0179] 2. The preparation method and steps of the HIV-1 virus non-nucleoside reverse transcriptase inhibitor drug-resistant mutation detection chip are the same as in Example 1.
[0180] 3. Preparation of samples to be tested
[0181] The samples to be t...
Embodiment 3
[0199] Embodiment 3: Using the present invention to detect HIV-1 virus non-nucleoside reverse transcriptase inhibitor resistance mutations in plasma, whole blood and nucleic acid samples
[0200] This example illustrates that the method and kit provided by the present invention can be used for the detection of HIV-1 virus non-nucleoside reverse transcriptase inhibitor resistance mutations in plasma, whole blood and nucleic acid samples.
[0201] 1. The preparation method and steps of oligonucleotide primers and probes are the same as in Example 1.
[0202] 2. The preparation method and steps of the HIV-1 virus non-nucleoside reverse transcriptase inhibitor drug-resistant mutation detection chip are the same as in Example 1.
[0203] 3. Preparation of samples to be tested
[0204] In this embodiment, clinically collected whole blood (WB-4-5), plasma (XJ-3-5) and nucleic acid (R-3-4, D-2) samples are detected. After high-throughput sequencing, the whole blood sample WB-4 conta...
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