The invention discloses a multi-target joint optimized antibiotic molecule design
system and method applied to the field of biological
medicine, and the method comprises the steps: obtaining FabI
enzyme and AcrAB-TolC
efflux pump structure data, extracting double-target space and physicochemical characteristics, and constructing a joint
pharmacophore model containing a FabI inhibition domain and an
efflux pump blocking domain; screening candidate molecules meeting a double-
domain space matching threshold, screening high-affinity double-target molecules through conformation sampling and free energy calculation, and forming a
lead compound library through multi-layer
filtration of
metabolic stability, membrane penetrability,
quantum chemical properties and synthesis feasibility; carrying out
electron effect,
chain length or
heteroatom fine tuning on dominant molecules through in-vitro bacteriostasis and
efflux inhibition experiment feedback, and carrying out iterative optimization until MIClt is met; 2 [mu] g / mL and the efflux inhibition rate is gt; according to the present invention, the
antibacterial effect and the
drug resistance inhibition ability are significantly improved, the molecular synthesizability and the
biological safety are ensured, and the
engineering design new path is provided for the
Gram-negative bacterium
drug resistance crisis.