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PCR (Polymerase Chain Reaction) detection reagent and kit of Japanese pratylenchus coffeae

A detection kit and detection reagent technology, which are applied in the field of PCR detection reagents and kits of Brachybody japonica, can solve the problems of unpublished molecular biology detection reports of Brachybody japonica, and achieve strong practicability and high sensitivity Effect

Active Publication Date: 2015-05-13
宁波中盛产品检测有限公司 +1
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Brachybody japonicum is only found in Japan, and there is no related report in my country
There are no published reports on the molecular biology of Brachybody japonicum

Method used

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Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0012] Embodiment 1, the PCR detection kit of Brachybody nematode japonicus

[0013] 100 or 200 reaction system, 50μL reaction system includes: Mg-free 2+ 5.0 μl of 10x PCR buffer with a concentration of 25 mM MgCl 2 5.0 μL solution, 4.0 μL dNTP solution with a concentration of 0.1 mM, 0.6 μL Taq enzyme solution with a concentration of 5 U / μL, 3.0 μL each of upstream primer solution and downstream primer solution with a concentration of 10 μM. Taq enzyme solution and dNTP solution were purchased from Treasure Bioengineering (Dalian) Co., Ltd., wherein the upstream primer solution contained a primer with the nucleotide sequence GGCAACGGGC CTAGTTATGA, and the downstream primer solution contained a primer with the nucleotide sequence GACTCGCGCACACGATAAAC.

Embodiment 2

[0014] Embodiment 2, DNA extraction method

[0015] Pick a single nematode and put it into a 200 μL PCR tube [add 10 μL double distilled water and 5 μL 10×PCR buffer (without Mg 2+ )], placed in liquid nitrogen for more than 1 min (or -70 °C for 0.5 h), and immediately heated at 85 °C for 2 min after taking it out. Then add 1 μL of 1 mg / mL proteinase K to the PCR tube, heat at 56°C for more than 30 minutes, and heat at 95°C for 10 minutes to obtain a DNA template.

Embodiment 3

[0016] Embodiment 3, PCR detection method

[0017] Use the PCR detection kit of Brachybody japonica for detection, and the PCR reaction system is: no Mg 2+ 5.0 μl of 10x PCR buffer with a concentration of 25 mM MgCl 2 5.0 μL solution, 4.0 μL dNTP solution with a concentration of 0.1 mM, 0.6 μL Taq enzyme solution with a concentration of 5 U / μL, 3.0 μL each of upstream primer solution and downstream primer solution with a concentration of 10 μM, DNA template 1.0-5.0 μL, ddH 2 O make up 50 μL. PCR reaction conditions: pre-denaturation at 94°C for 3min; denaturation at 94°C for 30S, annealing at 55°C for 30S, extension at 72°C for 30S, a total of 35 cycles; after the last cycle, extension at 72°C for 6min. Electrophoresis: 5 μL of PCR products were separated by 1.0% (weight / volume) agarose gel electrophoresis, stained with DNA dyes, and visualized under an ultraviolet gel imaging system. If the specific fragment size was 176bp, it was Brachybody japonicus .

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PUM

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Abstract

The invention discloses a PCR (Polymerase Chain Reaction) detection reagent and a kit of Japanese pratylenchus coffeae. The PCR detection reagent comprises a pair of specific primers; an upstream primer has a nucleotide sequence shown as GGCAACGGGCCTAGTTATGA; and a downstream primer has a nucleotide sequence shown as GACTCGCGCACACGATAAAC. The specific primers are specific and sensitive to the Japanese pratylenchus coffeae; the size of amplified specific segments is 176bp; no strip segment is specific to other pratylenchus coffeaes; due to the adoption of the specific primers and the kit, the detection can be finished in 4 hours; the PCR detection reagent is high in sensitivity and strong in practicability.

Description

technical field [0001] The invention relates to the detection technology of Brachybody nematodes, in particular to a PCR detection reagent and kit for Brachybody nematodes. Background technique [0002] Pratylenchus Filipjev (1936) is an obligate endoparasitic nematode in plant roots. It is one of the most diverse, widely distributed and most harmful groups of plant pathogenic nematodes, and has very important economic significance. In 2007, China included Brachyphytes nematodes (non-Chinese species) in the List of Imported Plant Quarantine Pests of the People's Republic of China, and implemented strict quarantine at ports to protect my country's agricultural and ecological safety. The short body nematode Pratylenchus japonicus Ryss, 1988 was intercepted from Acer palmatum from Japan for the first time in Ningbo port. There is no distribution in China, it is a non-Chinese species, and it is a phytosanitary pest imported into my country. N. japonicum was first mentioned by ...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/68
CPCC12Q1/686C12Q2531/113
Inventor 顾建锋何洁陈先锋
Owner 宁波中盛产品检测有限公司