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Method for extracting microbial dna from lignocellulose anaerobic fermentation material and its complete set of reagents

A technology for lignocellulose and fermentation materials, applied in the field of extracting microbial DNA from lignocellulose anaerobic fermentation materials and its complete set of reagents, which can solve the problems of limited impurity removal ability, small number of samples, and lack of information on key microbial groups

Active Publication Date: 2018-12-04
LESHAN NORMAL UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

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Problems solved by technology

Although the traditional SDS method, CTAB method and SDS-CTAB combination method extract high quality and purity of total DNA, it is difficult to effectively obtain microbial DNA adsorbed on the surface of lignocellulose, resulting in the loss of some key microbial group information, and The number of samples taken at one time is small
Functional kit methods such as soil, silt, and feces have the advantages of strong specificity, rapidity and convenience, and a large sample size for one extraction. However, for lignocellulosic anaerobic fermentation materials with high humic acid and miscellaneous protein content, The impurity removal ability of this method is limited, and the total DNA purity of the extracted microorganisms is relatively poor; in addition, the sample quality required for this method to extract the total DNA at one time is very little (0.3-0.5g), and the concentration of the total microbial DNA extracted is also low
At present, it is difficult for most methods to obtain total microbial DNA with high purity and concentration for lignocellulosic materials. There is an urgent need for a mature method for extracting microbial DNA from lignocellulosic anaerobic fermentation materials.

Method used

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  • Method for extracting microbial dna from lignocellulose anaerobic fermentation material and its complete set of reagents
  • Method for extracting microbial dna from lignocellulose anaerobic fermentation material and its complete set of reagents
  • Method for extracting microbial dna from lignocellulose anaerobic fermentation material and its complete set of reagents

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Embodiment 1

[0062] Embodiment 1, the extraction of lignocellulose anaerobic fermentation material microbial DNA

[0063] The complete set of reagents for extracting microbial DNA used in this embodiment consists of eluent, stabilizer, washing liquid and complete set of lysis reagents:

[0064] The eluent is a solution composed of water and solute, and the solute and its concentration are respectively 9.0g / L sodium chloride, 0.12g / L potassium chloride, 0.24g / L calcium chloride, 0.2g / L sodium bicarbonate and 0.15g / L potassium dihydrogen phosphate;

[0065] The stabilizer is a sterile solution composed of water and solute, the solute and its concentration are respectively 6mM Tris-HCl and 3mM ethylenediaminetetraacetic acid (EDTA), and the pH of the stabilizer is 8.0;

[0066]The washing liquid is a sterile solution composed of water and solute, the solute and its concentration are 60mM Tris-HCl, 15mM EDTA, 5.8g / L NaCl and 15g / L PVP-40, and the pH of the washing liquid is 8.0;

[0067] The...

Embodiment 2

[0087] Embodiment 2, LCEW method extracts different material microbial DNA

[0088]The microbial DNA of different lignocellulose anaerobic fermentation materials was extracted by using the LCEW method in Step 1 of Example 1, and the materials used were material ①, material ② and material ③. The experiment was repeated three times, and each time the experiment was repeated, the fresh original lignocellulose anaerobic fermentation material in step 1 of Example 1 (the material was a mixed fermentation product of cow dung and corn stalks fermented for 30 days and with a solid content of 15%) were respectively Replace with the above materials ①-③, and keep the other steps unchanged, and obtain the microbial DNA of materials ①-③ respectively.

[0089] Qualitative detection of the microbial DNA of material ①-③, the detection method is referring to the "qualitative detection of DNA extracted by different methods" in step 2 of embodiment 1, the results are as follows figure 2 Shown i...

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Abstract

The invention discloses a method for extracting DNA of microorganisms on anaerobic fermentation materials of lignocelluloses and a complete set of reagent. The method comprises the following steps of (S1) washing microorganisms on materials by using an eluant to obtain a microorganism eluate, and removing impurities in the microorganism eluate to obtain microorganisms, wherein the eluant is composed of a solvent and a solute, the solvent is water, and the solute comprises the components with the concentrations as follows: 9.0g / L sodium chloride, 0.12g / L potassium chloride, 0.24g / L calcium chloride, 0.2g / L sodium bicarbonate and 0.15g / L monopotassium phosphate; and (S2) extracting the DNA of the microorganisms to obtain the DNA of the microorganisms. Experiments prove that method for extracting the DNA of the microorganisms on the anaerobic fermentation materials of lignocelluloses and the complete set of reagent can be used for extracting the DNA of microorganisms on anaerobic fermentation materials of different lignocelluloses.

Description

technical field [0001] The invention relates to a method for extracting microbial DNA of lignocellulose anaerobic fermentation materials and a complete set of reagents in the field of biotechnology. Background technique [0002] The essence of anaerobic fermentation methane production process is that multiple microbial groups work together to continuously decompose complex lignocellulose until methane and carbon dioxide are produced. In recent years, with the increasing shortage of natural gas energy and smog pollution, the advantages of bio-natural gas (biogas with methane content greater than 95%), such as low cost, clean environmental protection, and sustainability, have gradually emerged, and the process of producing methane from lignocellulosic materials has begun To the direction of scale, industrialization and industrialization. Qualitative and quantitative understanding of the diversity and growth and reproduction rules of each functional microbial group in the anae...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12N15/10
Inventor 马旭光袁旭峰敦越江滔
Owner LESHAN NORMAL UNIV