High-flux detection method of circulating tumor DNA lung cancer driver gene

A detection method, a high-throughput technology, applied in the direction of biochemical equipment and methods, microbial measurement/inspection, etc., can solve the problems of patient suffering, invasiveness, and difficulty in obtaining patient samples, and achieve strong predictability and accuracy high effect

Pending Publication Date: 2018-02-23
JIAXING YUNYING MEDICAL INSPECTION CO LTD
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AI Technical Summary

Problems solved by technology

Based on the detection of tumor tissue samples, there are two problems: 1. Most of the tumor tissue comes from biopsy techniques, namely puncture and biopsy forceps biopsy, which will bring great pain to the patient and is an invasive detection; 2. For some advanced For patients who cannot undergo puncture or surgery, it is difficult to obtain patient samples, so it is difficult to carry out targeted drugs for patients based on the test results
Therefore, a problem arises that more treatment options require more samples from patients

Method used

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  • High-flux detection method of circulating tumor DNA lung cancer driver gene

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Embodiment Construction

[0044] A kind of detection method of circulating tumor DNA lung cancer gene of the present invention, comprises the steps:

[0045] 1. Sample library preparation:

[0046] (1) Pipette 60 ul of purified DNA (ctDNA) and 40 ul of Endprep mix into a single PCR tube, pipette to mix, and briefly centrifuge for end repair. The reaction conditions are 30°C and 30 min.

[0047] (2) Take out the magnetic beads half an hour in advance to return to room temperature, shake and mix, take 180ul of magnetic beads and add them to the end-repaired PCR product, beat and mix, and incubate in the greenhouse for 5 minutes.

[0048] (3) Put the PCR single tube on the magnetic stand, let it stand for 5 minutes, remove the supernatant, keep the PCR tube on the magnetic stand, add 200ul of 80% ethanol (newly prepared) to rinse, let stand for 30s, remove the supernatant, 80 Rinse twice with % ethanol, and dry at room temperature for 10 minutes (with 2 minutes remaining, use a small grab to suck up the ...

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Abstract

The invention discloses a high-flux detection method of a circulating tumor DNA lung cancer driver gene. According to the method, a mutant gene which is the most common of the existing lung cancer isselected, and combined with a second generation high-flux sequencing technology to more comprehensively detect the gene mutation condition of the lung cancer. Since a blood plasma sample of a patientis collected, the method can greatly reduce the detection injury of the patient; secondly, since the whole-exome detection is performed on 22 lung cancer genes, so that the method is more comprehensive compared with the detection method based on real-time PCR and first-generation Sanger sequencing technology; and since only 22 genes are detected, the sample can be detected in a greater sequencingdepth, so that the detection precision can reach 0.1 percent. Therefore, a reference can be provided for more and better individual precision therapeutic schemes of the patient.

Description

technical field [0001] The invention relates to a high-throughput detection method for driving genes in circulating tumor DNA, in particular to a detection method for lung cancer gene mutations. Background technique [0002] Lung cancer is the most common malignant tumor worldwide, and its morbidity and mortality rank first among all cancers. Every year, more than 1.3 million patients die of lung cancer worldwide, nearly half of which occur in developing countries. According to the statistics of the Ministry of Health of my country in 2010, the mortality rate of lung cancer was 30.83 / 100,000, and lung cancer has become the malignant tumor with the highest morbidity and mortality. Lung cancer can be divided into two types based on histopathology: small cell carcinoma (SCLC) and non-small cell lung cancer (NSCLC), among which non-small cell carcinoma accounts for about 85% of severe cases of lung cancer. The 5-year survival rate of lung cancer patients in my country is only ...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6869
CPCC12Q1/6869C12Q2535/122C12Q2565/549C12Q2565/519
Inventor 张道允巩子英叶建伟王伟
Owner JIAXING YUNYING MEDICAL INSPECTION CO LTD
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