Primer probe composition and kit for detecting polymorphism of human CYP2C19 gene and application
A technology of CYP2C19 and gene polymorphism, applied in the field of molecular biology, can solve the problems of certain sample quantity requirements, easy pollution of amplification products, and difficult optimization of primer design, achieving high sensitivity and accuracy, effective It is beneficial to clinical operation and avoids the effect of mutual interference
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Embodiment 1
[0088] Embodiment 1 The clinical application of detection kit of the present invention
[0089] 1. Design of specific primers and fluorescent probes for polymorphic sites of CYP2C19 gene
[0090] According to the dbSNP database (https: / / www.ncbi.nlm.nih.gov / snp / term=) published by NCBI (National Center for Biotechnology Information) ), CYP2C19*3 (rs4986893, c.636G>A) and CYP2C19*17 (rs12248560, c.-806C>T) SNP site information, design multiple specific primers for CYP2C19 gene polymorphism sites And specific fluorescent probes, specific primers are designed at both ends of the mutation site of the detected gene, and the specific fluorescent probe covers the mutation site of the detected gene. After a large number of experimental screening, the final product with high sensitivity and good specificity Three pairs of specific primers for amplifying CYP2C19*2, CYP2C19*3, and CYP2C19*17 and specific fluorescence for detecting CYP2C19*2, CYP2C19*3, and CYP2C19*17 Probes CYP2C19*2-P...
Embodiment 2
[0145] Example 2 Verification of CYP2C19 gene polymorphism detection results
[0146] The 250 clinical samples to be tested in Example 1 were sequenced using the gold standard sequencing method while using the above primers and probes for qPCR testing. The results showed that the genotype obtained by the gold standard sequencing method for each sample to be tested was consistent with The genotypes obtained by the method in Example 1 were consistent, with 0 missed detection and an accuracy of 100%.
[0147] The minimum detection limit of the primer and probe composition of the present invention is detected, and the steps are as follows:
[0148] 1. Randomly select 10 cases of DNA samples extracted in Example 1, and dilute their concentrations to 1ng / ul, 0.5ng / ul, and 0.25ng / ul respectively. The DNA templates of 3 concentrations of each sample were loaded into 3 replicate PCR wells respectively, and the loading volume was 4ul, and the minimum detection limit test was carried ou...
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