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Signal detection method for gene chip of oligonucleotide with length more than 50 basic groups

A gene chip and oligonucleotide technology, applied in the biological field, can solve problems such as operator personal injury and environmental nuclear radiation pollution, and achieve the effects of high sensitivity, reliable results and high detection rate.

Inactive Publication Date: 2005-08-31
ZHEJIANG UNIV
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  • Abstract
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AI Technical Summary

Problems solved by technology

At present, signal detection methods for gene chips mainly include fluorescent signal detection methods labeled with Cy5 / Cy3 and isotope-labeled signal detection methods, and these methods are currently mostly used in signal detection of high-throughput gene chips, but regardless of the application The signal detection methods all need to label the probe, and the application of Cy5 / Cy3 fluorescent labeling requires Cy5 and Cy3 to be carried out twice respectively. Using isotope labeling can not only cause personal injury to the operator, but also cause nuclear radiation pollution to the environment.

Method used

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  • Signal detection method for gene chip of oligonucleotide with length more than 50 basic groups
  • Signal detection method for gene chip of oligonucleotide with length more than 50 basic groups
  • Signal detection method for gene chip of oligonucleotide with length more than 50 basic groups

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Experimental program
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Effect test

Embodiment

[0020] (1) Preparation of gene chips for oligonucleotides longer than fifty bases

[0021] Such as figure 2 As shown, the gene chip is a film 6 covered with a positively charged material on the plane of the planar support carrier 5, and a dot matrix 7 is arranged on the surface of the film layer. Exogenous gene probes: 1) 35S promoter, 2) FMV35S promoter, 3) Nos terminator, 4) NPTII gene, 5) CryI (AC) gene, 6) Cry9c gene, 7) transformed CP4-EPSPS Gene, 8) 35s-CTP2, 9) CP4-EPSPS gene, 10) GOX gene, 11) Bar gene, 12) Barnase gene, 13) Barstar gene, 14) CryIA(a) gene, 15) Lectin gene, 16) Napin gene, 17) Zein gene, 18) Sad1 gene, 19) Lat52 gene or foreign gene fragment.

[0022] The dot matrix 7 is a dimple-like structure 8 arranged, and space intervals are maintained between the dot-matrix 7 , and the exogenous gene probes for transgenic plant judgment are respectively covered in each dimple-like structure 8 . The film layer 6 of positively charged material is a film layer o...

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Abstract

A method for detecting the signals of gene chip whose oligonucleotide has a length more than 50 bases includes such steps as PCR amplification of target gene, detecting, boiling positive product for modifying it, cooling on ice, wetting the gene chip by phosphoric acid solution, prehybridizing in prehybridizing liquid, adding said modified DNA, hybridizing, water with different lotions, dyeing, rinsing, and detecting signal under UV light or fluorescent microscope.

Description

technical field [0001] The invention belongs to the field of biotechnology, and in particular relates to a signal detection method of a gene chip of an oligonucleotide with a length greater than 50 bases. Background technique [0002] Since Adams proposed expressed sequence tag (expressed sequence tag) in 1992 and the subsequent establishment of large-scale expressed sequence tag technology, as well as the development of biotechnology and the needs of life science development, gene chip technology has emerged as the times require. The essence of gene chips (Biochips) is to arrange a series of addressable biorecognition molecules fixed at a certain position in an orderly array on a small substrate (R.J. Lipshutz et al., Bio Techniques 19 (1995), 442 -447; S.P.Fodor et al., Nature 364(1993), 555-556; S.P.Fodor et al., Science 251(1991), 767-773; A.C.Pease et al., Proc.Natl.Acad.Sci.USA 91 (1994), 5022-5026). Since the original gene chip was mainly used for DNA sequence deter...

Claims

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Application Information

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IPC IPC(8): C12Q1/68
Inventor 李德葆骆红梅戴承恩姜玉新董海涛
Owner ZHEJIANG UNIV
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