Unlock instant, AI-driven research and patent intelligence for your innovation.

Solid medium and process for the storage and rapid purification of nucleic acid

a technology applied in the field of solid medium and process for the storage and rapid purification of nucleic acid, can solve the problems of biomolecule denaturation and deactivation, inability to retrieve covalently bound molecules from the filter membrane, and slow molecule immobilization,

Inactive Publication Date: 2001-04-05
SMITH MARTIN A +3
View PDF0 Cites 21 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

10. a) Molecule immobilization is often slow requiring 20-180 minutes for reaction completion.
11. b) High ligand and biomolecule concentration is needed for fast immobilization.
12. c) Constant agitation is needed during the immobilization process that may result in biomolecule denaturation and deactivation.
13. d) Once the immobilization process is complete, often a blocking (capping) step is required to remove residual covalent binding capacity.
14. e) Covalently bound molecules can not be retrieved from the filter membrane.
This is a manor disadvantage for applications where several downstream processes are required from the same sample, such a STR profiling and genotyping.
Multiple punching is very time consuming, and as yet, has not lent itself to simplified automation.
Nucleic acid immobilized to a solid filter support, although a suitable template for singular PCR reactions, cannot be measured or detected by traditional techniques such as optical density or fluorescence.
Many countries prohibit the sale of genetically modified food products and therefore require testing to be carried out.
However, for genotyping experimental where many PCR reactions are carried on the same DNA population, the process of having to punch out different 1 millimeter disks for every primer set used is too time consuming to be efficient.

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • Solid medium and process for the storage and rapid purification of nucleic acid
  • Solid medium and process for the storage and rapid purification of nucleic acid
  • Solid medium and process for the storage and rapid purification of nucleic acid

Examples

Experimental program
Comparison scheme
Effect test

example 1

Heat Elution

78. Several drops of freshly finger-stick drawn blood was spotted to the filter membrane of the invention and allowed to air-dry for two minutes. Once dried two 1 mm diameter punches were taken from the dried blood spot and applied to individual 2000 ul polypropylene PCR tubes. To each tube containing a single 1 mm blood punch, 200 ul of FTA Purification Reagent (Fitzco, Inc) was added. Per 500 ml: 0.29 g NaCl; 5 ml 1 M Tris pH 7.5; 1 ml 0.5 M EDTA; 2.5 ml Triton x-100. Tubes were incubated for five minutes at room temperature with no shaking. Following incubation the FTA purification Reagent was aspirated from the tube. A second aliquot of 200 ul of FTA Purification Reagent was added to each tube. The tubes were incubated for five minutes at room temperature without shaking. Following incubation the FTA Purification Reagent was aspirated from both tubes. 200 ul of TE (10 mM Tris-HCl, 1 mM EDTA, pH 8.0) buffer was then added to each tube. The tubes were incubated for fiv...

example 2

Full Elution Protocol

80. Several drops of freshly finger-stick drawn blood were spotted to the filter membrane of the invention and allowed to air-dry for two minutes. Once dried two 1 mm diameter punches were taken from the dried blood spot and applied to individual 200 ul polypropylene PCR tubes. To each tube containing a single 1 mm blood punch, 200 ul of FTA Purification Reagent (Fitzco, Inc) was added. Tubes were incubated for five minutes at room temperature with no shaking. Following incubation the FTA purification Reagent was aspirated from the tube, 20 ul of the aspirate was retained. A second aliquot of 200 ul of FTA Purification Reagent was added to each tube. The tubes were incubated for five minutes at room temperature without shaking. Following incubation the FTA Purification Reagent was aspirated from both tubes, 20 ul of the aspirate was retained. 200 ul of TE buffer was then added to each tube. The tubes were incubated for five minutes at room temperature without sh...

example 3

Comparison of Elution

83. Single stranded DNA can be readily detected with the use of OliGreen.RTM. (Molecular Probes, Inc), a fluorescent probe specific for the single stranded molecule. By using OliGreen the total single stranded DNA eluted from the filter membrane of the invention can be determined, as well as other single stranded DNA purification methods. A standard curve for single stranded genomic DNA was constructed according to manufacture's instructions (Molecular Probes, Inc) (see FIG. 3a).

84. 5 ul of freshly finger-stick drawn blood was spotted to a 7 mm disk of the filter membrane, composed of a chemically coated porous glass microfiber filter membrane, of the invention and also to a 7 mm disk of the commercially available FTA solid support. Both spots were allowed to air-dry for two minutes. Once dried, the punches were applied to individual 1.5 ml polypropylene Eppendorf tubes. To each tube containing a single 7 mm blood punch, 1 ml of FTA Purification Reagent (Fitzco,...

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

PUM

PropertyMeasurementUnit
temperaturesaaaaaaaaaa
temperaturesaaaaaaaaaa
temperatureaaaaaaaaaa
Login to View More

Abstract

A medium for storage and subsequent analysis of a genetic material includes a support for immobilizing the genetic material thereon and allowing subsequent elution of the genetic material therefrom and a coating functionally associated with the support for enabling cellular lysis and releasing the genetic material from the lysed cells while stabilizing the immobilized released genetic material. A method of storing the genetic material and subsequently analyzing the genetic material includes the steps of immobilizing the genetic material on a support while enabling cellular lysis and release of genetic material from the lysed cells and stabilizing the immobilized released genetic material on the support. The genetic material is then eluted to generate a soluble genetic material fraction. The eluted genetic material can be analyzed.

Description

CROSSREFERENCE TO RELATED APPLICATIONS1. This present application is a continuation application of U.S. Ser. No. 09 / 507,548, filed Feb. 18, 2000, which is a divisional application of U.S. Ser. No. 09 / 398,625, filed Sep. 18, 1999, which is a conversion of U.S. Provisional patent application Ser. No. 60 / 130,716, filed Apr. 22, 1999, and that claims the benefit of U.S. Provisional application Ser. No. 60 / 123,990, filed on Mar. 11, 1999, which applications are incorporated herein by reference.2. The present invention relates to medium and methods for storage and subsequent purification of nucleic acids or genetic material from whole cells. In particular, the invention relates to the storage and purification of nucleic acids from a biological mixture of molecules in a fluid phase on a support. The purified nucleic acid may then be utilized for a variety of analyses such as amplification by the polymerase chain reaction (PCR) (PCR Technology: Principles and Applications for DNA Amplificat...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

Application Information

Patent Timeline
no application Login to View More
Patent Type & Authority Applications(United States)
IPC IPC(8): B01L3/00C07H21/02C07H21/04C12N1/06C12N15/10C12P19/34C12Q1/68G01N1/34G01N33/00
CPCB01L3/5023B01L3/5029B01L2300/0822B01L2300/163C12N1/06C12N15/1006C12Q1/6806G01N1/405C12Q2565/625Y10T436/143333
Inventor SMITH, MARTIN A.IYER, MRIDULAQU, DAQINGDAVIS, JAMES C.
Owner SMITH MARTIN A