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A kind of identification method of d1 type rice cytoplasmic sterile line and its hybrid combination

A technology of hybrid combination and identification method is applied in the identification field of D1 type rice cytoplasmic sterile line and its hybrid combination, which can solve the problem of not developing a specific molecular marker sterile type and the like, and achieves simple operation, labor saving and sensitivity. The effect of detection

Active Publication Date: 2017-05-10
江西省超级水稻研究发展中心
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0007] The D1 rice cytoplasmic sterile line is a sporophytic sterile line derived from Dongxiang wild rice. It is completely different from other types of sporophytic sterile lines that have been popularized and applied. At present, no corresponding specific molecular markers have been developed. Able to quickly identify the type of infertility

Method used

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  • A kind of identification method of d1 type rice cytoplasmic sterile line and its hybrid combination
  • A kind of identification method of d1 type rice cytoplasmic sterile line and its hybrid combination
  • A kind of identification method of d1 type rice cytoplasmic sterile line and its hybrid combination

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Effect test

Embodiment 1

[0050] A. Identification of Mitochondrial Specific Sequence of the New Dongye D1 Rice Cytoplasmic Male Sterile Line D1A

[0051] The mitochondrial DNA of the new Dongye D1 rice cytoplasmic sterile line D1A was extracted, and the entire mitochondrial genome of D1A was sequenced. RT98C comparative analysis obtained 13 new Dongye CMS-specific sequences greater than 300bp, of which 5 were completely D1A mitochondria-specific, and the sequence sizes were: the gene sequence shown in the sequence table SEQ ID NO: 1, and its length It is 5797bp; as the gene sequence shown in the sequence listing SEQ ID NO: 2, its length is 3858bp; as the gene sequence shown in the sequence listing SEQ ID NO: 3, its length is 532bp; as shown in the sequence listing SEQ ID NO: 4 The gene sequence shown in the sequence table is 333bp in length; the gene sequence shown in SEQ ID NO: 5 in the sequence table is 1623bp in length.

[0052] B. Screening of Mitochondria-specific Molecular Markers of New Dongye...

Embodiment 2

[0065] Application of Specific Molecular Markers of D1 Rice Cytoplasmic Sterile Line and Its Hybrid Combination in Identification of Newly Breed D1 CMS Line and Seed Purity

[0066](1) DNA preparation of rice cytoplasmic male sterile lines: Honglian-type CMS line Luohong 3A; Wufeng A, Xinrong A; Yinshui-type CMS Zhong 9A; Java-type CMS Yue 4A; D2454A and DYA obtained by crossing with D1-type CMS D1A, and the maintainers of D2454A and DYA are 2454B and Yue 4A respectively. 4B. Each material is taken and grown to two leaves and one heart seedling 0.5 gram and packs in EP tube, breaks up in shock proofer, and CTAB method extracts total DNA, with reference to Cold Spring Harbor Laboratory Press (Cold Spring Harbor Laboratory Press) publication, Nina Irwin and Molecular Cloning by Kaaren A. Janssen, ed.

[0067] (2) Mitochondria-specific marker PCR amplification system:

[0068] The standard PCR amplification reaction system is 20 μl, and the composition is as follows:

[0069]...

Embodiment 3

[0075] Using mitochondrial specific molecular markers to identify the D1 rice cytoplasmic male sterile line hybrid rice combination, the specific operation is as follows:

[0076] (1), specific molecular markers

[0077] The combination of molecular markers DM-1, DM-2 and DM-3, which have been identified as completely unique to the D1 rice cytoplasmic sterile line and its hybrid combinations, were selected for identification.

[0078] (2) Select 10 three-line hybrid combinations: Shanyou 63, Xieyou 1429, Rongyou 225, D1A / DR3, D1A / DR5, Luoyou 8, Maxie 63, Yueyou Huazhan, Luliangyou 98 , Dianza 41, including 2 wild-type hybrid combinations, 1 Yunnan-type hybrid combination, 1 red lotus-type hybrid combination, 1 dwarf-type hybrid combination, 1 Maxie-type hybrid combination, and two-line hybrid combination 1, wherein D1A / DR3 and DPA / DR5 are hybrid combinations obtained by crossing the D1-type rice cytoplasmic sterile line with DR3 and DR5 (these two lines are described in the a...

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Abstract

The invention relates to the field of rice identification, in particular to a D1 type rice cytoplasmic male sterile line and an identification method of hybrid combination of the D1 type rice cytoplasmic male sterile line. Any one or more of base sequences of SEQ ID NO: 1, SEQ ID NO: 2 and SEQ ID NO: 3 are used for designing primers so that gene amplification identification can be performed. According to the identification method, on the basis of genetic variation of rice mitochondrial genomes, firstly, mitochondria of the D1 type rice cytoplasmic male sterile line are extracted and sequenced, then, genomics analysis is performed on the mitochondria and other rice varieties, and three high-specificity Dongye type sterile line D1 A mitochondria specific sequences are screened out; primers are designed according to the sequences, and then whether the D1 type rice cytoplasmic male sterile line and a specific mark of the hybrid combination of the D1 type rice cytoplasmic male sterile line exist or not can be identified through a molecular detection means. Through the identification method, the D1 type rice cytoplasmic male sterile line and the hybrid combination of the D1 type rice cytoplasmic male sterile line can be fast, accurately, efficiently and sensitively detected, and the identification method is easy and convenient to operate, stable and reliable.

Description

technical field [0001] The invention relates to the field of rice identification, in particular to an identification method for a D1 type rice cytoplasmic sterile line and a hybrid combination thereof. Background technique [0002] In the 1970s, my country successfully applied the three-line method to cultivate hybrid rice, and promoted the planting on a large scale in production, realizing the second leap in my country's rice yield per unit area. From 1976 to 2005, the accumulative planting area of ​​hybrid rice in my country was 5.25 billion mu, and the rice harvest increased by about 650 million tons. Therefore, the development of hybrid rice is an important way to increase food production and solve food security problems (Yuan Longping, 2008). The basis for the use of three-line hybrid rice is cytoplasmic male sterility. Since the discovery of the wild-type cytoplasmic male sterile line and its widespread application, from the 1970s to the mid-1980s, breeders have bred a...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/68
CPCC12Q1/6895C12Q2600/13C12Q2600/158
Inventor 谢红卫蔡耀辉蔡怡聪李永辉钱明娟毛凌华颜龙安
Owner 江西省超级水稻研究发展中心
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