Primer and probe as well as kit used for avian influenza virus universal type direct RT-PCR detection
A technology of RT-PCR and avian influenza virus, which is applied in the field of primers, probes and kits for general-purpose direct RT-PCR detection of avian influenza virus, to achieve the effects of improving detection speed, saving costs and reducing operation steps
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[0031] In one embodiment of the present invention, the kit also includes a general-purpose internal standard solution of avian influenza virus; preferably, the above-mentioned internal standard solution is obtained by cloning the general-type M gene of avian influenza virus into the RNA pseudovirus expression vector pAR and obtaining The plasmid pAR-AIVUN was prepared by Escherichia coli transformation. Specifically, the preparation method includes:
[0032] (1) Cloning the universal M gene of avian influenza virus into the RNA pseudovirus expression vector pAR to obtain the plasmid pAR-AIVUN;
[0033] (2) Transform the plasmid pAR-AIVUN into Escherichia coli BL21;
[0034](3) The recombinant bacterium obtained in step (2) is cultured overnight in the LB liquid medium containing Amp;
[0035] (4) After taking the overnight culture and continuing to the logarithmic growth phase of the bacteria, IPTG induces the culture superfluid;
[0036] (5) collect the thalline, crudely e...
Embodiment 1
[0046] The RT-PCR detection method of the universal direct amplification of embodiment 1 bird flu virus
[0047] 1. Design of universal RT-PCR detection primers and probes for avian influenza virus
[0048] According to the nucleotide sequence of avian influenza in GenBank, the conserved sequence region of the M gene was selected as the amplified region, and the upstream and downstream primers of the general type of avian influenza virus and the detection probe of the general type of avian influenza virus were respectively designed by using the ABIPrimerExpress software. The sequences are as follows :
[0049] The sequence of the upstream primer (AIVUN-PF) of the universal type of avian influenza virus is:
[0050] 5'-TGAACACGACCTAGACTGACCCAGAA-3' (SEQ ID NO: 1);
[0051] The sequence of the downstream primer (AIVUN-PR) of the universal type of avian influenza virus is:
[0052] 5'-TGGCATGTTGGACACAATGTCAAG-3' (SEQ ID NO: 2);
[0053] The sequence of the universal detection...
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