Quadruple RT-PCR method simultaneously detecting multiple kinds of pepper viruses and application of method
A technology of RT-PCR and pepper, which is applied in the field of crop virus detection technology, can solve problems such as time-consuming, high cost, and environmental pollution, and achieve the effects of reducing reagents and consumables, improving detection efficiency, and increasing virus types
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Embodiment 1 4
[0039] The establishment and optimization of embodiment 1 quadruple RT-PCR detection system
[0040] Primer design:
[0041] Among them, TMV, CMV, PVY and BBWV-2 are the main viruses in pepper production in my country. Since there are no reports on multiple RT-PCR detection for these four viruses, in order to ensure the successful establishment of the detection system, we compared and analyzed these four viruses. According to the requirements of multiplex PCR for primers and the conserved sequences of each virus, 2 sets of 8 pairs of primers were designed with Primer 5.0, and a preliminary RT-PCR test was carried out on the 2 sets of primers, and the better working ones were screened out. Group 1, on this basis, redesigned and tested the primers of BBWV2, and finally determined four pairs of primers. The lengths of the four pairs of primers differ by at least 100bp, and there is no or little interaction between the four pairs of primers.
[0042] Primers were synthesized by Sha...
Embodiment 2 4
[0060] Embodiment 2 quadruple RT-PCR detection field capsicum plant sample
[0061] 43 samples of pepper plants with yellowing and mosaic symptoms were investigated in Changsha, the main pepper producing area in Hunan, and brought back to the laboratory with soil, and the young leaves were selected, ground with liquid nitrogen, and RNA was extracted. Repeat RT-PCR to detect whether there is CMV, TMV, PVY and BBWV-2 infection, the test results are shown in Figure 4 , and the results showed that quadruple RT-PCR could well detect the virus in pepper samples from the main producing areas of Hunan. Among the 43 samples, CMV, TMV, BBWV-2 and PVY were detected in 35, 16, 10 and 1 samples, and the detection rates of CMV, TMV, BBWV-2 and PVY were 81.4%, 37.21%, 23.26% and 2.33%, 43 samples were infected by a single virus or a combination of multiple viruses, indicating that the occurrence of CMV in peppers in our sampling area is the most serious, and the occurrence of PVY is the li...
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