A primer, method, kit and application for enriching target regions of brca1 and brca2 genes
A technology for target regions and genes, applied in biochemical equipment and methods, DNA / RNA fragments, DNA preparation, etc.
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Embodiment 2
[0086] Example 2 Kit
[0087] The kit provided by the present invention includes the above-mentioned 5 sets of primer pairs, and also includes a DNA polymerase capable of amplifying long fragments.
[0088] Wherein, the DNA polymerase with long-fragment amplification ability is a commercially available long-fragment DNA polymerase kit. In one embodiment of the present invention, the PrimeStar GXL product such as Takara Company is used, which contains a buffer solution, dNTP, DNA polymerase and other components.
[0089] Wherein, the dosage ratio of each primer set in the kit is: in the total volume of 20 μl of reaction solution, each primer set is 3.2 μl.
[0090] Specifically, the ratio of each component in the kit is preferably:
[0091]
[0092] In particular, the use conditions of the kit are: pre-denaturation at 95°C for 5 minutes; denaturation at 98°C for 10 seconds, annealing at 62°C for 15 seconds, extension at 68°C for 9 minutes, 32 cycles.
[0093] Wherein, the...
Embodiment 3
[0102] Example 3 Enrichment of BRCA1 and BRCA2 gene target regions
[0103] 1. Sample processing and genomic DNA extraction
[0104] The cell lines purchased from ATCC are adherent cells. After adherent culture in T25 cell culture flasks, genomic DNA was extracted using the EasyPure Micro Genomic DNA Kit, a spin-column genomic DNA extraction kit from Quanshijin Company. The specific steps are as follows: Extraction according to the operating instructions to obtain a DNA extract, elute the DNA extract with 100 microliters of elution buffer, and detect the quality of the extraction by nanodrop 2000, and determine the concentration. The final 260 / 280 value is greater than 1.8, and the concentration is all at 30 DNA solution between 60ng / μl.
[0105] 2. Amplify the target gene fragment
[0106] Set up the amplification reaction system:
[0107]
[0108] The reaction system was pre-denatured at 95°C for 5 minutes, denatured at 98°C for 10 seconds, annealed at 62°C for 15 seco...
Embodiment 4
[0127] Example 4 Detection of BRCA1 and BRCA2 Gene Sequence Mutations
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