An artificial transcription activator dcas9-tv and its encoding gene and application
A transcription activator, dcas9-tv technology, applied in genetic engineering, using vectors to introduce foreign genetic material, peptides, etc., can solve the problems of increasing off-target, increasing the complexity of experimental operations, limiting applications, etc., and achieves wide application prospects, transcription The effect of improving activation efficiency and lowering technical threshold
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Embodiment 1
[0045] Construction of CRISPR / Cas9-derived artificial transcriptional activators
[0046] The codons of the 10th amino acid "D" and the 840th amino acid "H" of pcoCas9 (plant codon-optimized SpCas9) were replaced with the codons of amino acid "A" by PCR site-directed mutagenesis technology to obtain nuclease inactive Cas9, namely dCas9. The primers used are as follows:
[0047] Cas9-D10A-F: GTACTCTATCGGACTTGCTATCGGAACCAACTCTG
[0048] Cas9-D10A-R: CAGAGTTGGTTCCGATAGCAAGTCCGATAGAGTAC
[0049] Cas9-H840A-F: TGATTACGATGTTGATGCTATCGTTCCACAGTCTT
[0050] Cas9-H840A-R: AAGACTGTGGAACGATAGCATCAACATCGTAATCA
[0051] Q5 high-fidelity PCR polymerase was purchased from NEB Company, and the site-directed mutagenesis PCR reaction system was as follows:
[0052]
[0053] The HBT-pcoCas9 plasmid was constructed and preserved by our laboratory. Reaction program: denaturation at 98°C for 30 s; denaturation at 98°C for 10 s, annealing at 55°C for 30 s, extension at 72°C for 10 min, 16...
Embodiment 2
[0062] Transcriptional activation of Arabidopsis WRKY30 gene based on artificial transcriptional activator dCas9-TV
[0063] (1) Design of Arabidopsis WRKY30 gene promoter target sequence and construction of gRNA expression vector
[0064] Find the promoter sequence of the Arabidopsis WRKY30 gene from the NCBI database, and select the target sequence "AAGAACGAAGAAAGCTGATG" within 200bp upstream of the transcription start site TGG " (the underline is the PAM structure), and design gRNA-WRKY30 accordingly. For this gene, the present invention uses two kinds of expression cassettes AtU6-1:gRNA:TTTTTT and AtU6-26:gRNA:TTTTTT, and its construction all uses the overlapping PCR method , The overlapping sequence is a 20nt target sequence. AtU6-1 and AtU6-26 promoters have been previously cloned by our laboratory. The PCR primers used to construct AtU6-1: gRNA: TTTTTT are as follows:
[0065] U6-1-SacI-F: CGAGAGCTCAGAAATCTCAAAATTCCG
[0066]U6-1-WRKY30-R: CATCAGCTTTCTTCGTTTCTTCAAT...
Embodiment 3
[0098] Transcriptional activation of Arabidopsis RLP23 gene based on artificial transcriptional activator dCas9-TV
[0099] (1) Design of Arabidopsis RLP23 gene promoter target sequence and construction of gRNA expression vector
[0100] Find the promoter sequence of the Arabidopsis RLP23 gene from the NCBI database, and select the target sequence "AAATCCCTTAACGTATAACT" within 200 bp upstream of the transcription start site TGG " (the underline is the PAM structure), and gRNA-RLP23 was designed accordingly. The AtU6-26:gRNA:TTTTTT expression cassette was constructed using the overlapping PCR method, and the overlapping sequence was the 20nt target sequence. The PCR primers used were as follows:
[0101] U6-26-SacI-F: CGAGAGCTCAGCTTTTTTTCTTCTTCT
[0102] U6-26-RLP23-R: AGTTATACGTTAAGGGATTTCAATCACTACTTCGACTCT
[0103] gRNA-RLP23-F:AAATCCCTTAACGTATAACTGTTTTAGAGCTAGAAATA
[0104] gRNA-SacI-R: CGAGAGCTCAAAAAAGCACCGACTCGGTGC
[0105] After the overlapping PCR final products w...
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