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A kind of origami structure based on double-stranded nucleic acid and its preparation method and application

A double-stranded nucleic acid, origami structure technology, applied in biochemical equipment and methods, genetic engineering, resistance to vector-borne diseases, etc., can solve problems such as limiting wide application, achieve good binding effect, simple preparation process, and strong versatility Effect

Active Publication Date: 2022-07-12
THE NAT CENT FOR NANOSCI & TECH NCNST OF CHINA
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0003] So far, DNA origami structures rely on long single-strand framework DNA, which largely limits their widespread application

Method used

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  • A kind of origami structure based on double-stranded nucleic acid and its preparation method and application
  • A kind of origami structure based on double-stranded nucleic acid and its preparation method and application
  • A kind of origami structure based on double-stranded nucleic acid and its preparation method and application

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0304] In this example, an origami structure based on double-stranded nucleic acid is prepared. The schematic diagram of the preparation method is as follows: figure 1 shown, the specific steps are as follows:

[0305] (1) Expression and purification of gene editing proteins

[0306] The gene editing protein includes two parts, inactive Cas9 and inactive Cas12a. The preparation method is as follows:

[0307] The coding genes of inactive Cas9 and inactive Cas12a were constructed into the pET 28a expression vector, and the sequences were verified by sequencing; then the expression plasmids were transformed into Escherichia coli Rosetta strain, and isopropyl-β-D-thiol was added. Galactoside induces the expression of gene editing protein; collect the bacteria expressing gene editing protein and carry out ultrasonic breakage, the supernatant is preliminarily purified by affinity chromatography nickel column, and then purified by molecular sieve gel chromatography, and the purified...

Embodiment 2

[0318] In this example, the gene editing complex containing the gRNA shown in SEQ ID NO: 29-46 and the linearized P3487 (SEQ ID NO: 2) with a length of 3487 bp are used to assemble the origami structure. The method is the same as that in Example 1. Combined with schematics such as Image 6 shown;

[0319] Atomic force microscopy was performed on the origami structure, and the results were as follows Figure 7 As shown, a double-stranded nucleic acid-based origami structure was successfully assembled. The structure has a regular morphology, a particle size of about 160 nm, and good dispersibility.

Embodiment 3

[0321] Compared with Example 2, the framework DNA was P3487 without linearization treatment, and other conditions were the same as Example 2.

[0322] Atomic force microscopy was performed on the origami structure, and the results were as follows Figure 8 As shown, a double-stranded nucleic acid-based origami structure was successfully assembled. The structure has a regular morphology, a particle size of about 160 nm, and good dispersibility.

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Abstract

The invention provides an origami structure based on double-stranded nucleic acid and its preparation method and application. The origami structure is formed by self-assembly of double-stranded nucleic acid and a gene editing complex; the gene editing complex includes a gene editing protein and gRNA, The gRNA complementary binds to the recognition sequence on the double-stranded nucleic acid; the gene editing complex folds and compresses the double-stranded nucleic acid into an origami structure. Through reasonable sequence analysis and structural design, the present invention utilizes the unique sequence recognition characteristics of the gene editing complex to bind to two sites on the double-stranded nucleic acid, so that the double-stranded nucleic acid is folded and compressed to form a nanostructure, solving the problem of compressing the double-stranded nucleic acid. The problem of nucleic acids has achieved the purpose of preparing origami structures using double-stranded nucleic acids as a framework. The origami structures are universal and provide ideas for studying the folding and delivery of linear double-stranded nucleic acids or plasmids.

Description

technical field [0001] The invention belongs to the field of biotechnology, and relates to an origami structure based on double-stranded nucleic acid, a preparation method and application thereof. Background technique [0002] In recent years, nucleic acid nanotechnology has made great progress, especially in the field of biotechnology tool development. At present, scientists have developed a variety of self-assembled DNA nanostructures using deoxyribonucleic acid (DNA) as materials, and conducted in-depth research on their functions. Among them, the DNA origami structure has regularity, modifiability, programmability, and good biocompatibility, and has been widely used in the fields of bioimaging, diagnosis, and treatment. The DNA origami structure is based on a series of short oligonucleotides (staple chains) that fold long single-stranded DNA (framework DNA) in a certain annealing procedure to form a nanostructure. The DNA origami structure is designed according to the ...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12N15/63C12N15/64C12N15/113C12N9/22
CPCC12N15/63C12N15/64C12N15/113C12N9/22C12N2310/20Y02A50/30
Inventor 丁宝全刘建兵武田田
Owner THE NAT CENT FOR NANOSCI & TECH NCNST OF CHINA