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Method for detecting TP53 gene point mutation and kit for method

A detection method, point mutation technology, applied in biochemical equipment and methods, microbial measurement/inspection, etc., can solve problems such as Taq enzymes are difficult to combine with inert primers, mutation recognition sequence discrimination, long equipment detection process, etc., to increase once The effects of non-specific amplification sites, fewer instruments, and low cost

Inactive Publication Date: 2011-08-10
SUZHOU UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Although the technology in method (1) is more sensitive than the existing mutation detection method, its required inactive primers are expensive, and the sensitivity is still low. It often takes 40-50 PCR cycles for a single copy of DNA molecules, and this method is not effective for There is a phenomenon of sequence discrimination in mutation recognition, that is, the pyrophosphate hydrolysis activity of Taq enzyme cannot hydrolyze some specific sequences, so it is difficult to bind inert primers, so there is no or little DNA polymerization reaction coupled with them
Although the method (2) has the characteristics of high sensitivity and reliability, the next-generation sequencing technology has yet to mature technically, and it relies on factors such as expensive equipment and a long detection process, which is still limited to experimental research and has not been practical Applied to clinical diagnosis

Method used

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  • Method for detecting TP53 gene point mutation and kit for method
  • Method for detecting TP53 gene point mutation and kit for method
  • Method for detecting TP53 gene point mutation and kit for method

Examples

Experimental program
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Effect test

Embodiment 1

[0036] Specific primer pair 1, specific primer pair 2, and specific primer pair were designed for TP53 hotspot mutation codons 175 (mutation from CGC to CAC), 248 (mutation from CGG to CAG), and 273 (mutation from CGT to TGT) 3. As shown in the following table, the underlined bases are thio-modified bases:

[0037]

[0038] The corresponding PCR product sizes of the specific primer pairs mentioned in the above table are 250bp, 188bp, and 240bp, respectively.

Embodiment 2

[0040] A kit for detecting point mutations in the TP53 gene, comprising: 10× Pfu buffer (containing magnesium sulfate MgSO 4 ) 10 μL, dNTP (each 10 mM) 2 μL, high-fidelity DNA polymerase (Pfu) 1 μL, specific primer pair 1, specific primer pair 2, and specific primer pair 3 each 2 μL described in Example 1, wherein 1 μL each of sense primer and antisense primer, 50 μL of double distilled water (Milli-Q grade).

Embodiment 3

[0042] A method for detecting TP53 gene point mutation, the specific detection steps are:

[0043] 1) Taking human lung cancer lesion tissue as the object, DNA was extracted from the lesion tissue (extracted according to conventional methods), a total of 20 specimens;

[0044] 2) Using the kit described in Example 2, the specific primer pairs of the three groups of TP53-corresponding exon DNA fragments described in Example 1 were respectively mixed with the obtained DNA, 4 kinds of dNTP mixtures, a buffer containing magnesium ions, True DNA polymerase (Pfu) and double distilled water are mixed to form a separate PCR reaction system. The PCR reaction system is as follows:

[0045] 10×Pfu buffer (containing MgSO 4 )

2μL

dNTPs (10 mM each)

0.4μL

Pfu

0.2 μL

sense primer

0.5μL

antisense primer

0.5μL

dna

1μL

double distilled water

15.4μL

total capacity

20 μL

[0046] Wherein, the fin...

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Abstract

The invention belongs to the field of gene mutation detection, and particularly relates to a TP53 gene point mutation detection method with high sensitivity and a kit for the method. The method comprises the following steps of: 1) extracting DNA according to the conventional technology; 2) then configuring a polymerase chain reaction (PCR) reaction system containing a specific primer pair, DNA polymerase and a PCR conventional component; and 3) performing PCR amplification on the DNA obtained in the step 1), analyzing the PCR product, and judging whether the PCR product has mutation, wherein the last second base of a sense primer in the specific primer pair is a sulfo modified base, and the DNA polymerase is high-fidelity DNA polymerase Pfu. The method has the advantages of rapidity, highspecificity, high reliability, sensitivity, low condition dependency, wide application platform and the like.

Description

technical field [0001] The invention belongs to the field of gene mutation detection, and in particular relates to a highly sensitive TP53 gene point mutation detection method and a kit thereof. Background technique [0002] The TP53 gene (gene), discovered in 1979, is one of the genes most strongly associated with tumors so far. The gene is located on chromosome 17, and its protein product has the function of transcription factor. The genes controlled by the TP53 protein are involved in the process of cell division and survival. Like other tumor suppressor genes, the function of the TP53 protein is to prevent uncontrolled cell growth. [0003] The TP53 protein interacts directly with DNA, as well as with other proteins that govern how cells behave. When DNA damage or other cell damage is detected, TP53 immediately initiates the mechanism of apoptosis (apoptosis). The TP53 protein plays a key role in maintaining normal cell regulation, and about half of all tumors, regar...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68
Inventor 孙万平王伟大肖莉李凯
Owner SUZHOU UNIV