Method for preparing DL2000 DNA molecular weight marker as well as product and applications thereof

A molecular weight standard, ptz19r-250 technology, applied in the field of bioengineering, can solve the problems of band with heterobands, low success rate, low amplification yield, etc., and achieve the effect of easy expansion of scale and reasonable concentration

Active Publication Date: 2013-05-01
JIERUI BIOENG SHANGHAI
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Second, PCR amplification is greatly affected by various conditions, such as instruments, templates, amplification enzymes, different batches of primers, and other reagents, so there will be large differences between different amplification batches
Third, the success rate of PCR amplification is relatively low, and there may be mixed bands in the amplified bands for a long time, or the specificity of the target bands is not very strong, the amplified bands are wider, or the amplified bands may be mixed. Low incremental yields, and other unsuccessful cases
Therefore, there will be large differences between different batches in PCR amplification, and it is very labor-intensive and reagent-intensive, and the production process is difficult to standardize

Method used

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  • Method for preparing DL2000 DNA molecular weight marker as well as product and applications thereof
  • Method for preparing DL2000 DNA molecular weight marker as well as product and applications thereof
  • Method for preparing DL2000 DNA molecular weight marker as well as product and applications thereof

Examples

Experimental program
Comparison scheme
Effect test

specific Embodiment approach

[0025] The present inventor constructed 6 DNA fragments with different lengths contained in the DL2000 DNA molecular weight standard into two vectors respectively, and directly digested with restriction enzymes after amplification of the two vectors, and mixed the digested products to obtain the The DL2000 DNA molecular weight standard composed of 6 DNA fragments of different lengths, and only by adjusting the mixing ratio of the two plasmids, can make the 5 bands of the DL2000 DNA molecular weight standard have the same brightness, and the indicator band (750bp) is twice as bright as the other bands. Each band is clearly shown in the electrophoresis. The specific implementation is as follows:

[0026] 1. Construction of two vector DNAs

[0027] a) General

[0028] The two vectors in the present invention are based on the commercial vector pTZ19R (purchased from Fermentas life sciences, catalog number: SD0141) with a very high yield, using conventional experimental methods, ...

Embodiment 1

[0066] Example 1PCR legal point mutation transformation carrier

[0067] Experimental method: The mutation method used is operated according to the common mutation schemes in molecular biology. These schemes are already very mature, and corresponding kits are available for selection. In the experiment of the present invention, the most mature PCR method is used for point mutation, a pair of primers are synthesized for each site to be mutated, amplified by conventional PCR method, and screened by conventional molecular cloning method to obtain the required plasmid. The final plasmid was verified by sequencing and the results met the requirements of the experimental design. Here, the point mutation at position 855 of the pTZ19R vector is specifically described, and the point mutation method at other positions is exactly the same, only the primers corresponding to the position can be used.

[0068] The primers used are artificially synthesized, and other related reagents are fro...

Embodiment 3

[0109] Amplification and extraction of embodiment 3 plasmid

[0110] Engineering bacteria culture:

[0111] Inoculate 200 μL of bacteria in 250 mL medium, and shake the bacteria at high speed for 12-14 hours. The medium uses 2xYT high-yield medium (16g peptone, 10g yeast powder, 5g NaCl per liter).

[0112] Plasmid extraction:

[0113] 1. Bacteria collection: Pour 3 / 4 of the tube into a 50ml round-bottomed centrifuge tube, centrifuge at 1500g for 5min, and discard the supernatant. Collect 2 bacteria. Invert on absorbent paper for half a minute. A total of about 60 mL of bacteria was collected twice.

[0114] 2. Add Sol I: Add 6ml sol I, vortex to disperse the cells evenly.

[0115] 3. Add Sol II: add 10ml sol II, gently invert 5~10 times.

[0116] 4. Add Sol III: add 7ml sol III, first gently invert 3 times, then shake vigorously to mix well. Let stand for 5min.

[0117] 5. Precipitate protein: centrifuge at 10000rpm for 7min.

[0118] 6. Take the supernatant by filt...

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Abstract

The invention discloses a method for preparing a DL2000 DNA molecular weight marker. The method is characterized by adopting a plasmid enzyme-cut method comprising the following steps of: (1) firstly distributing six fragments to two carriers for amplification, wherein the DL2000 DNA molecular weight marker comprises the six DNA fragments as follows: 100bp, 250bp, 500bp, 750bp, 1kb and 2kb; the carrier 1 comprises the fragment 100bp with the copy number 10, the fragment 250bp with the copy number 4, the fragment 500bp with the copy number 2, the fragment 750bp with the copy number 1, and the fragment 1kb with the copy number 1; and the carrier 2 comprises 2kb with the copy number 1 and the fragment 750bp with the copy number 4; and (2) carrying out enzyme-cutting on the carrier 1 and the carrier 2 by restriction enzyme, and then mixing, thus the molecular weight marker is obtained. According to the invention, the brightness of each belt in the product obtained finally is uniform, the molecular weight marker is convenient to produce, and is convenient for large scale production, and the quality of each batch is stable.

Description

technical field [0001] The invention belongs to the field of bioengineering, in particular to a method for preparing DL2000 DNA molecular weight standards and its products and applications. Background technique [0002] DNA molecular weight standard, commonly known as DNA Marker, is a mixture of a series of DNA fragments of known length, and is the most commonly used reagent in molecular biology experiments. By electrophoresis of the DNA fragment obtained in the experiment and the DNA Marker in the same agarose gel, and by comparing the sample fragment with the DNA Marker, the size of the DNA fragment obtained in the experiment can be roughly estimated. [0003] There are usually two preparation methods for each band of DNA Marker: PCR amplification and plasmid digestion. [0004] The PCR amplification scheme is to design multiple sets of PCR primers for amplification to obtain DNA fragments of corresponding size. Then each fragment was purified and quantified. Finally, t...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12N15/10C12N15/11C12Q1/68C12N15/70C12R1/19
Inventor 赫英俊孙兰菊严引娣
Owner JIERUI BIOENG SHANGHAI
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