Related protein at early blossoming stage of rice as well as encoding gene thereof
A technology related to protein and rice, applied in genetic engineering, plant genetic improvement, angiosperms/flowering plants, etc., can solve the problems of high production cost and low seed production yield, and achieve low cost, high breeding efficiency, identification and selection simple effect
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Embodiment 1
[0047] Example 1 Early flowering gene screening in the early flowering mutant emf1 of the present invention
[0048] (1) Test materials
[0049] (1) Emf1, an early flowering mutant, is an early flowering mutant that the inventors screened from an EMS (ethyl methylsulfonate) mutagenesis library constructed on the background of the indica rice maintainer Yixiang 1B. The mutant was backcrossed with Yixiang 1B for multiple generations, and the trait of early flowering was genetically stable.
[0050] (2) Early flowering mutant emf1 and wild type Yixiang 1B (see figure 1 and figure 2 ), and 02428 (japonica rice) were obtained from the Genetic Research Laboratory of the Rice Research Institute of Sichuan Agricultural University.
[0051] (2) Test method
[0052] (1) Hybridization of emf1 and 02428 to construct F 1 Generation population, and selfing to get F 2 generation populations for genetic mapping. Backcross emf1 with Yixiang 1B to construct BC 1 f 3 Generation populat...
Embodiment 2
[0066] Example 2 The gene knockout verification test of the early flowering time selection gene OsEFT1 of the present invention
[0067] (1) Test materials
[0068] The Escherichia coli competent DH5α used in this experiment was purchased from Beijing Quanshijin Biological Co., Ltd., and the Agrobacterium EHA105 strain was donated by Wang Wenming's research group at the Rice Research Institute of Sichuan Agricultural University.
[0069] (2) Test method
[0070] 1. Construction of CRISPR / Cas9-OsEFT1 gene knockout vector
[0071] Using F: 5'-ATGCGTCGCGTCACGGTG-3' and R: 5'-CAGGAGCAGCCGCCGGCC-3' as primers, the cDNA of mutant emf1, Yixiang 1B, and Zhonghua 11 were used as templates to amplify the gene respectively, and found that the gene The highly homologous nucleotide sequences in the coding region of the indica rice Yixiang 1B and the japonica rice Zhonghua 11 indicated that the protein encoded by the gene had no difference between the indica rice Yixiang 1B and the japoni...
Embodiment 3
[0112] Example 3 Transcriptome sequencing test of early flowering mutant emf1 of the present invention
[0113] RNA-seq sequencing splicing was carried out at Shanghai Ouyi Biological Co., Ltd. The specific steps are as follows:
[0114] (1) RNA extraction and library construction
[0115] (1) On the previous day, select the plants whose spikelets had bloomed to 1 / 3 to be marked, and collect the mutant emf1, Wild-type Yixiang 1B spikelets were quick-frozen in liquid nitrogen and stripped on ice, and three biological replicates were set up. Use kit mirVana TM miRNA ISOlation Kit, Ambion-1561 extracts total RNA, the sample quality requirement is ≥5 μg, and the purity requirement is OD: 1.8-2.2.
[0116] (2) Strand-specific transcription building library
[0117]After extracting the total RNA of the pulp and digesting the DNA with DNase, the eukaryotic mRNA is enriched with Oligo(dT) magnetic beads; the mRNA is broken into short fragments with specific reagents, and the brok...
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