Synthesis method and applications of organic mineralized structure based on framework nucleic acid coding
A synthesis method and nucleic acid technology, applied in the field of nano-manufacturing, can solve problems such as inability to synthesize ordered silica materials, difficult chemical synthesis, and inability to achieve 3D scale.
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Embodiment 1
[0054] The present invention provides a kind of synthesis method based on the organic mineralization structure of framework nucleic acid code, comprises the following steps: SS1, the DNA origami structure (DNA-diatom) that is nucleic acid framework is provided with the diatom-like shell shape of hierarchical pore structure solution. Using DNA to directly imitate the structural unit of the diatom shell, skipping the steps of transcription and translation of nucleic acid into protein and induction of mineral synthesis. The diatom shell DNA nanostructure has three levels of hole structures with different sizes, and is formed by different types of DNA structures. Specifically, the staple short chain, M13mp18 long chain and phiX 174 long chain were mixed at a ratio of 20:1:1, in 1×TAE-Mg 2+ Buffer (Tris, 40mM; acetic acid, 20mM; EDTA, 2mM; and magnesium acetate 12.5mM; pH 8.0) was annealed, and the temperature was slowly lowered from 95°C to 25°C to obtain a DNA origami structure ...
Embodiment 2
[0070] Through molecular dynamics (MD) simulation, the importance of the synthesis method provided by the invention in preparing the DOS composite structure is explored, and verified through a control experiment. Using the 198bp 3D DNA origami structure as a model for molecular dynamics simulation, a region is obtained by extending outward from the center of the DNA origami structure, and the number of silica clusters in this region is statistically analyzed. Figure 6 is the cross-sectional view of the simulated system; Figure 7 is the number of different types of silica clusters in the selected area. When the number of TMAPS in the silica clusters is greater than 3, the number of silica clusters in the selected region exceeds the average number of silica clusters in the solution. This is due to the high concentration of Mg required for the DNA origami structure 2+ to maintain its structural stability, so a single TMAPS cannot convert Mg 2+ Compete down. Only when TMAPS ...
Embodiment 3
[0080] The analysis of the growth kinetics of the triangular DNA origami-silica complex demonstrates that this method can achieve precise replication of the DNA origami structure.
[0081] TEM statistical results show that, as Figure 14 Shown is the TEM schematic diagram before and after the nucleic acid reaction of the triangular framework. Under TEM observation, its geometric shape is highly consistent. Such as Figure 15 As shown, the average side lengths of the triangular DNA origami structure and the corresponding DOS structure are 120.2±2.3nm and 122.9±4.1nm, respectively, and the side length of the latter only increases by about 2.7nm, which shows that the framework nucleic acid coding strategy has a strong influence on the DNA origami structure. Highly reducible. At the same time, the side widths W of the two are 22.6±1.5nm and 25.9±1.4nm respectively. Compared with the theoretical side width (26nm) of the triangular DNA origami structure, the side of the pure DNA o...
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