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Secretion of fatty acids by photosynthetic microorganisms

a technology of photosynthetic microorganisms and fatty acids, which is applied in the field of photosynthetic microorganisms, can solve the problems of no disclosure of converting inorganic carbon directly into secreted fatty acids, cost-intensive steps in the accumulation of neutral lipids, and no cost reduction in the production of lipid-based products

Inactive Publication Date: 2009-12-03
SYNTHETIC GENOMICS INC
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Benefits of technology

The present invention is about improving the production of photosynthetic microorganisms that can produce fatty acids from inorganic carbon. The invention provides methods to remove the fatty acids from the culture medium without the need for cell harvesting, which lowers costs. The invention also enables the production of fatty acids of defined chain lengths, which can be used in various products like fuels and chemicals. The photosynthetic microorganisms used in the invention contain a recombinant expression vector that encodes an exogenous acyl-ACP thioesterase, which preferentially releases fatty acid chains containing 6 to 20 carbons from the ACP thioesters. The invention also includes a method to recover the secreted fatty acids and modify them for further use. Overall, this invention enables a more efficient and cost-effective way to produce fatty acids for various applications.

Problems solved by technology

Typically, eukaryotic microalgae are grown under nutrient-replete conditions until a certain cell density is achieved, after which the cells are subjected to growth under nutrient-deficient conditions, which often leads to the accumulation of neutral lipids.
Harvesting of the cells and extraction of the lipids are cost-intensive steps.
Further, there is no disclosure of converting inorganic carbon directly to secreted fatty acids using a photosynthetic organism grown in a culture medium containing inorganic carbon as the primary carbon source.

Method used

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  • Secretion of fatty acids by photosynthetic microorganisms
  • Secretion of fatty acids by photosynthetic microorganisms
  • Secretion of fatty acids by photosynthetic microorganisms

Examples

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Effect test

example 1

Secretion of Fatty Acids by Strains Derived from the Unicellular Photoautotrophic Cyanobacterium Synechococcus elongatus PCC 7942

[0076]The Cuphea hookeriana FatB2 gene encoding an acyl-ACP thioesterase (ChFatB2) enzyme was modified for optimized expression in Synechococcus elongatus PCC 7942. First, the portion of the gene that encodes the plastid transit peptide region of the native ChFatB2 protein was removed. The remainder of the coding region was then codon-optimized using the “Gene Designer” software program (version 1.1.4.1) provided by DNA2.0, Inc. The nucleotide sequence of this derivative of the ChFatB2 gene (hereafter ChFatB2-7942) is provided as SEQ ID NO:7. The protein sequence encoded by this gene is provided in SEQ ID NO:8.

[0077]Two different versions of the trc promoter, trc (Egon, A., et al., Gene (1983) 25:167-178) and “enhanced trc” (hereafter trcE, from pTrcHis A, Invitrogen) were used to drive the expression of ChFatB2-7942 in S. elongatus PCC 7942. The trc promo...

example 2

Secretion of Fatty Acids by Strains Derived from the Unicellular Photoheterotrophic Cyanobacterium Synechocystis sp. PCC 6803

[0082]The trcE::ChFatB2-7942 and trc::ChFatB2-7942 fusion fragments, together with the lacIq gene, were cloned into the shuttle vector pSGI-YC03 (SEQ ID NO:11), which enables transformation of Synechocystis sp. PCC 6803 via double homologous recombination-mediated integration into the “RS1” site of the chromosome (Williams, Methods Enzymol. (1988) 167:766-778). The constructed plasmid containing the trcE::ChFatB2-7942 expression cassette and lacIq gene is designated pSGI-YC08. SEQ ID NO:12 represents the sequence between and including the RS1 recombination sites of pSGI-YC08. The constructed plasmid containing the trc::ChFatB2-7942 expression cassette and lacIq gene is designated pSGI-YC14. SEQ ID NO:13 represents the sequence between and including the RS1 recombination sites of pSGI-YC14.

[0083]Each of the plasmids pSGI-YC08, pSGI1-YC14, and the control vector...

example 3

Secretion of Fatty Acids by Strains Derived from the Filamentous Cyanobacterium Anabaena variabilis ATCC 29413

[0085]The trc::ChFatB2-7942 and trcE::ChFatB2-7942 fusion fragments, together with the lacIq gene, were PCR amplified using primers RS3-3F (SEQ ID NO:14) and 4YC-rrnBter-3 (SEQ ID NO:15) from pSG1-YC14 and pSGI-YC08, respectively, and then cloned into the shuttle vector pEL17, which enables transformation of A. variabilis ATCC 29413 via double homologous recombination-mediated integration into the nifU1 locus of the chromosome (Lyons and Thiel, J. Bacteriol. (1995) 177:1570-1575). The constructed plasmids are designated pSG1-YC69 and pSG1-YC70 for trc::ChFatB2-7942 and trcE::ChFatB2-7942, respectively.

[0086]Each of the plasmids pSG1-YC69, pSG1-YC70, along with the control vector pEL17, are introduced into wild-type A. variabilis ATCC 29413 cells via tri-parental conjugation, as described by Elhai and Wolk (Methods Enzymol. (1988) 167:747-754). Both recombinant and control st...

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Abstract

Recombinant photosynthetic microorganisms that convert inorganic carbon to secreted fatty acids are described. Methods to recover the secreted fatty acids from the culture medium without the need for cell harvesting are also described.

Description

CROSS-REFERENCE TO RELATED APPLICATIONS[0001]This application claims benefit of provisional application 61 / 007,333 filed 11 Dec. 2007. The contents of this application are incorporated herein by reference.TECHNICAL FIELD[0002]This invention relates to photosynthetic microorganisms that convert inorganic carbon to fatty acids and secrete them into the culture medium, methods of production of fatty acids using such organisms, and uses thereof. The fatty acids may be used directly or may be further modified to alternate forms such as esters, reduced forms such as alcohols, or hydrocarbons, for applications in different industries, including fuels and chemicals.BACKGROUND ART[0003]Photosynthetic microorganisms, including eukaryotic algae and cyanobacteria, contain various lipids, including polar lipids and neutral lipids. Polar lipids (e.g., phospholipids, glycolipids, sulfolipids) are typically present in structural membranes whereas neutral lipids (e.g., triacylglycerols, wax esters) ...

Claims

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Application Information

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Patent Type & Authority Applications(United States)
IPC IPC(8): C12P7/64C12N1/13C12N1/21C07C57/00C10L1/18C12P7/649
CPCC12N9/16C12P7/6409Y02T50/678Y02E50/13C12P7/649Y02P20/582Y02E50/10
Inventor ROESSLER, PAUL GORDONCHEN, YOULIU, BODODGE, COREY NEAL
Owner SYNTHETIC GENOMICS INC
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