Use of a compound and its derivatives for treating pneumococcal infectious diseases
A pneumococcus and compound technology, applied in the direction of boron compound active ingredients, antibacterial drugs, etc., to achieve the effect of low toxicity and inhibiting the growth of pneumococcus
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Embodiment 1
[0025] Example 1 The inhibitory effect of ZCL039 on SpLeuRS
[0026] 1. Inhibitory effect of ZCL039 on aminoacylation of SpLeuRS
[0027] 1.1. Experimental materials
[0028] 1) ZCL039: It can be prepared by referring to the preparation steps of compound 34 in Ding, D.Z., et al. (2010). Discovery of Novel Benzoxaborole-Based Potent Antitrypanosomal Agents. ACS Med. Chem. Lett., 1, 165–169.
[0029] 2) Preparation of pneumococcal leucyl-tRNA synthetase (SpLeuRS): Using pneumococcal genomic DNA as a template and using P1 / P2 (Table 1) as upstream and downstream primers, the SpLeuRS coding gene (NC_011900 .1). The PCR product was digested with Nco I / Xho I and inserted into the corresponding site of the pET30a vector, and the N-terminus was screened to carry His 6 Positive clones of the tag-encoding gene: pET30a-splrs. It was transformed into E.coli BL21(DE3) host bacteria for expression, the induced expression of protein was carried out according to the conventional method in ...
Embodiment 2
[0047] Example 2 Enzyme-catalyzed kinetics research
[0048] 1. Experimental method
[0049] 1) The aminoacylation reaction catalyzed by ZCL039 and substrate ATP:SpLeuRS was carried out at 37°C. In order to determine the kinetic constant of ATP inhibition in the presence of ZCL039, the reaction system contained different concentrations of ATP (0.3mM, 0.5 mM, 1.0mM, 1.5mM, 2.0mM, 4.0mM, 8.0mM), 40μM[ 3 H] Leucine (Leu), 10 μM tRNA Leu , 5 nM of SpLeuRS, and three concentrations of ZCL039 (0, 2 μM, 8 μM). Before the reaction, will contain SpLeuRS, [ 3 H] leucine, tRNA Leu And the reaction system with a certain concentration of ZCL039 was incubated at room temperature for 20 minutes, then ATP was used to start the reaction, and the reaction was terminated after 2 minutes to detect the amount of product produced. Obtain the curve of product generation rate and substrate concentration relation according to the Mie equation fitting, carry out nonlinear fitting to it again and o...
Embodiment 3
[0054] Example 3 Relationship between ZCL039 and SpLeuRS active center CP1
[0055] 1. Interaction of ZCL039 with wild-type SpLeuRS and SpLeuRS lacking CP1 active center
[0056] 1) Experimental material: CP1 deletion mutant (delCP1) of SpLeuRS. The construction method is as follows: using pET30a-splrs prepared in Example 1 as a template, according to the method of KOD-plus mutation kit (TOYOBO), using P3 / P4 (Table 1) The primers were used for inverse PCR amplification to construct the pET30a-splrs-delCP1 vector, in which Lys226-Thr411 (YP_002510309.1) in the CP1 domain of SpLeuRS was replaced by a sequence encoding the nonapeptide KEEIDGKIT. The gene expression and protein purification of the CP1 deletion mutant were performed according to the expression and purification of SpLeuRS in Example 1; SpLeuRS wild type (WT): the SpLeuRS prepared in Example 1 was used as the wild type control.
[0057] 2) Experimental method:
[0058] The reaction system is shown in Table 4. The 5...
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