Hepatitis B microRNA molecular marker composition and application thereof
A molecular marker, hepatitis B technology, applied in the direction of DNA / RNA fragments, recombinant DNA technology, microbial determination / inspection, etc., to achieve the effect of easy mass screening, high specificity, and simple operation
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Embodiment 1
[0035] Example 1: Collection and preparation of plasma samples
[0036] Between June 2012 and March 2014, 150 plasma samples meeting the criteria of healthy controls and 150 plasma samples meeting the above definition of hepatitis B were pre-collected from Beijing You'an Hospital affiliated to Capital Medical University.
[0037] Collect 10ml of peripheral venous blood and anticoagulate with EDTA. The plasma collection process is as follows: put the whole blood sample in a centrifuge at 4°C and centrifuge at 1,500-3,000g for 15 minutes. Carefully transfer the upper plasma layer to a 1.5 mL RNase-free sterile centrifuge tube with a 200 μL pipette. Label each sample. Be sure to store the plasma sample in an ultra-low temperature (-80°C) refrigerator within 4 hours.
Embodiment 2
[0038] Example 2: Extraction of total RNA in plasma
[0039] Use the RNA extraction kit (Beijing Kuangbo Biotechnology Co., Ltd.) to extract total RNA from the plasma, and add 1 μl (20 nM) of the sequence 5'-CAACCTCCTAGAAAGAGTA-3' (SEQ ID NO: 37) to each 250 μl of plasma. 1 (synthesized by Shanghai Sangon Bioengineering Technology Co., Ltd.) to monitor the extraction quality of RNA in plasma. The concentration of extracted total RNA was measured using Thermo NanoDrop2000c.
Embodiment 3
[0040] Example 3: Three-step method for quantitative detection of miRNA in plasma
[0041] (1) Add polyA tail:
[0042] i. Prepare a polyA-tailed reaction solution in an RNase-free PCR tube (Axygen, 200 μl), with a volume of 20 μl. Add 1 μl (20nM) of External Control-2 (synthesized by Shanghai Sangon Biotechnology Co., Ltd.) with the sequence 5'-TGAGCAACGCGAACAA-3' (SEQ ID NO: 38) to each 20 μl system to monitor miRNA tailing and inversion recording quality.
[0043]
[0044] (Note: The enzymes used in this experiment are all products of Beijing Kuangbo Biotechnology Co., Ltd.)
[0045] ii. Put the PCR tube containing the prepared reaction solution into a PCR machine (Thermo) and incubate at 37° C. for 1 hour.
[0046] (2) RT-PCR to obtain cDNA single strand:
[0047] i. Add 0.5 μl (0.5ng / μl) of RT-Primer (Shanghai Sangon Bioengineering Technology Co., Ltd. Synthesis), incubate at 70°C for 5 minutes, and immediately place on ice for at least 2 minutes.
[0048] ii. Pr...
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