Isothermal nucleic acid amplification reaction reagent and isothermal nucleic acid amplification method

An isothermal nucleic acid amplification and reaction reagent technology, applied in the field of molecular biology, can solve the problems of expensive instruments, increased instrument development costs, and large power consumption, so as to reduce the requirements of instruments and technologies, and simplify the nucleic acid amplification reaction process Effect

Active Publication Date: 2016-05-04
刘国宪
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0004] However, due to temperature changes and specific temperature conditions during the thermal cycle, the traditional PCR technology requires the instrument to have a sophisticated temperature control program, which can accurately raise and lower the temperature at a predetermined t...

Method used

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  • Isothermal nucleic acid amplification reaction reagent and isothermal nucleic acid amplification method
  • Isothermal nucleic acid amplification reaction reagent and isothermal nucleic acid amplification method
  • Isothermal nucleic acid amplification reaction reagent and isothermal nucleic acid amplification method

Examples

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Comparison scheme
Effect test

Embodiment 1

[0021] Example 1 Gene Amplification of Transgenic Maize NOS Terminator

[0022] Transgenic maize contains NOS terminator, but wild type maize does not have this gene sequence, therefore, transgenic maize can be identified by amplifying the sequence. In this embodiment, the NOS terminator of transgenic maize is detected by using the isothermal amplification reagent and method provided by the present invention.

[0023] (1) Primer design

[0024] Select the full sequence of the maize NOS terminator and submit it to the database on the website of the National Biological Center of the United States ( http: / / www.ncbi.nlm.nih.gov / ) to perform Blast search, and search for DNA fragments without high homology between the NOS terminator and the maize genome sequence through the website Blast program analysis. According to the Blast results, a 253bp sequence (SEQ ID No.1) was selected in the NOS terminator for primer design.

[0025] Template sequence (SEQIDNo.1):

[0026] cgttc...

Embodiment 2

[0036] Example 2 Detection of Mycobacterium tuberculosis complex flora

[0037]In this example, the insertion sequence IS6110 gene fragment of Mycobacterium tuberculosis complex (MTBC) is amplified by the constant temperature amplification kit method provided by the present invention, so as to realize the detection of Mycobacterium tuberculosis complex .

[0038] (1) Primer design

[0039] The full sequence of the selected insert sequence IS6110 was submitted to the database on the website of the National Biological Center of the United States ( http: / / www.ncbi.nlm.nih.gov / ) to perform Blast search, through the website Blast program analysis to find DNA fragments unique to the inserted sequence IS6110 and not having high homology with other viruses. In the present invention, the inventor selected a 523bp sequence (SEQ ID No. 7) from the inserted sequence IS6110 according to the Blast results for gene synthesis, and cloned it into the vector pET28a to prepare a recombinant ...

Embodiment 3

[0050] Example 3 CytB sequence amplification of meat-derived components

[0051] In this embodiment, the chromoprotein (CytB) sequence in the mitochondrial genome of the meat source components (chicken, duck and cattle) is amplified by the constant temperature amplification kit method provided by the present invention, so as to realize the detection of chicken and duck in the sample. Detection of three components of Wagyu.

[0052] (1) Primer design

[0053] The CytB sequences of selected meat source components (chicken, duck and cattle) were submitted to the database (http: / / www.ncbi.nlm.nih.gov / ) on the website of the National Biological Center of the United States for Blast retrieval, and the chicken was searched through the analysis of the website Blast program. CytB of ducks, cows and cows is unique to each other, and there are no high homology DNA fragments in other gene sequences. In the present invention, the inventors selected a segment in the CytB sequences of chic...

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Abstract

The invention provides an isothermal nucleic acid amplification reaction reagent. The isothermal nucleic acid amplification reaction reagent is characterized by comprising components as follows: 100-800 mM of a Tris-HCl buffer solution, 10-150 mM of sodium chloride, 10-150 mM of potassium chloride, 10-50 mM of magnesium chloride, 5-15 mM of dithiothreitol, 5%-20% of polyvinylpyrrolidone, 10-20 mM of ATP (adenosine triphosphate), 1-5 mM of dNPTs, 10-50 mM of phosphoenolpyruvate, 500-1,500 ng/mu l of pyruvate kinase, 10-500 ng/mu l of BSA (bovine serum albumin), 25-200 pmol of each primer in a primer group, 50-200 ng/mu l of T4 bacteriophage DNA helicase gp41 protein, 100-500 ng/mu l of streptomyces coelicolor recA protein, 200-1,000 ng/mu l of single-strand binding protein and 50-200 ng/mu l of escherichia coli DNA polymerase I. The invention further provides an isothermal nucleic acid amplification method. According to the isothermal nucleic acid amplification reaction reagent and the isothermal nucleic acid amplification method, nucleic acid amplification under the isothermal condition at the lower temperature is realized, and a traditional nucleic acid amplification reaction process is greatly simplified.

Description

technical field [0001] The invention belongs to the field of molecular biology. Specifically, the invention relates to a high-sensitivity isothermal nucleic acid amplification reaction reagent and an isothermal nucleic acid amplification method capable of realizing rapid amplification under isothermal conditions. Background technique [0002] Polymerase chain reaction (PCR) technology has been widely used in life science research since it was invented by Mullis et al. in 1983. In the traditional PCR reaction, in the presence of a reaction mixture of DNA templates, primers, four dTTPs, and an appropriate buffer, the target DNA fragment is amplified by DNA polymerase catalysis. The PCR reaction generally includes three steps of denaturation, annealing and extension, and each step is repeated 30 to 40 times, so that the exponential amplification of a small amount of target DNA fragments has reached a detectable level. Because PCR technology can amplify a small amount of nuclei...

Claims

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Application Information

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IPC IPC(8): C12Q1/68
CPCC12Q1/6844C12Q2531/119C12Q2563/107
Inventor 程奇刘国宪
Owner 刘国宪
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