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A method for identification of different migratory populations of Suifenhe three blockfish

A group and migration technology, applied in biochemical equipment and methods, microbial measurement/inspection, DNA/RNA fragments, etc., can solve problems such as germplasm mixing and morphological discrimination errors, and achieve simple steps, strong specificity, and identification The results are accurate

Active Publication Date: 2020-10-09
HEILONGJIANG RIVER FISHERY RES INST CHINESE ACADEMY OF FISHERIES SCI
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Therefore, in the process of artificial propagation, morphological discrimination errors are prone to occur, resulting in germplasm mixing.

Method used

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  • A method for identification of different migratory populations of Suifenhe three blockfish
  • A method for identification of different migratory populations of Suifenhe three blockfish

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Experimental program
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specific Embodiment approach 1

[0023] Specific embodiment 1: This embodiment is used to identify the microsatellite primer pair of Sankuai fish, wherein the black beach head effective detection marker microsatellite primer pair is SSR-1, and the nucleotide sequence of the SSR-1 forward identification primer is 5'- CTTGTGGTGCTGGTTCTTCA-3'; the nucleotide sequence of the SSR-1 reverse identification primer is 5'-GATGTGGCAGACCCTGACTT-3'; the golden beach head effective detection marker microsatellite primer pair is SSR-2, and the SSR-2 forward identification primer nucleotide The sequence is 5'-TGGTTGGACAGCAAACAAAG-3'; the nucleotide sequence of the SSR-2 reverse identification primer is 5'-TGAAGGTCTGGCTGATGATG-3'.

specific Embodiment approach 2

[0024] Specific implementation mode two: the method for identification of different migratory groups of Suifenhe three-piece fish in this embodiment is carried out according to the following steps:

[0025] 1. Extraction of sample DNA;

[0026] 2. PCR detection:

[0027] The PCR reaction system is 15 μl, consisting of 10.8 μl self-made mixed buffer, 0.5 μl forward detection primer, 0.5 μl reverse detection primer, 2 μl sample DNA, 0.2 μl Taq DNA polymerase with an enzyme activity of 1U and 1 μl deionized sterile water ; Among them, 0.5 μl of forward identification primer contains 10 mmol / L of forward identification primer, 0.5 μl of reverse identification primer contains 10 mmol / L of reverse identification primer, 2 μl of sample DNA contains 50 ng of sample DNA obtained in step 1, and 10.8 μl of homemade The mixed buffer contains 50mmol / L of KCl, 10mmol / L of Tris-HCl, 0.1% volume of TritonX-100, 1.5mmol / LM of MgCl 2 , 0.1% by volume of NP-40, 0.01% by volume of gelatin and 2...

specific Embodiment approach 3

[0036]Specific embodiment 3: The difference between this embodiment and specific embodiment 2 is: Step 1: Take the sample fish fin and place it in a 1.5ml centrifuge tube, then add 600 μl of lysate and 10 μl of proteinase K in sequence, mix well and place at 55°C Digest overnight in a water bath; after digestion, add 10 μl RNase and mix well, then place in a water bath at 37°C for 1 hour; then add 600 μl of a mixture of phenol and chloroform, mix well, and centrifuge at 12,000 r / min for 10 minutes at room temperature; take the centrifuged supernatant Place in another empty centrifuge tube, add 1ml of absolute alcohol and mix well, centrifuge at 12000r / min for 10min at room temperature; after centrifugation, spin to pour out the alcohol, then add 500μl of 70% ethanol, and centrifuge at 12000r / min for 5min at room temperature; Then use a pipette gun to remove the ethanol, and then centrifuge the residue at 12000r / min for 1min. After the centrifugation, pour out the residual alcoh...

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Abstract

The invention provides a method for identifying different migration groups of tribolodon brandti in the Suifen River, and relates to a method for identifying migration fishes. The invention aims to provide an identifying method. Pure 'Jintantou' and 'Heitantou' tribolodon brandti can be identified accurately, therefore, germplasm mixing caused in an artificial reproduction process is avoided, and germplasm resources are protected. A Heitantou tribolodon brandti effective detecting label microsatellite primer pair is SSR-1; and a Jintantou tribolodon brandti effective detecting label microsatellite primer pair is SSR-2. The method comprises the following steps: firstly, extracting DNA of a sample; secondly, carrying out PCR detection; thirdly, carrying out capillary gel electrophoresis on a PCR amplification product; and fourthly, identifying a result. The microsatellite primer pair for identifying the tribolodon brandti is designed voluntarily, is high in specificity and accurate in identifying result, and can accurately distinguish Jintantou tribolodon brandti, Heitantou tribolodon brandti or coeno-species of the Jintantou tribolodon brandti and the Heitantou tribolodon brandti. The method has the advantages of simple steps, high operability, low requirements on equipment, fast identifying process and accurate identifying result.

Description

technical field [0001] The invention relates to a method for identifying migratory fish germplasm. Background technique [0002] Three-piece fish, also known as Far East red-finned fish and beachhead fish, is a collective name for several indigenous economic species of the genus Tribolodon in the subfamily of Arrowfish. The three-piece fish are mainly distributed in the offshore waters of the Sea of ​​Japan in the North Pacific Ocean and its freshwater rivers, limited to Heilongjiang in the north, and the Korean Peninsula in the south (Heilongjiang, Sakhalin, Binhai in Russia, Hokkaido, Honshu, Shikoku, Kyushu, and the Korean Peninsula in Japan) ), which are only distributed in the Suifenhe and Tumen River basins in my country. Suifenhe is one of the water-injecting rivers in the Sea of ​​Japan. From April to June every year, after the gonads of the three fishes mature, they go up the river in batches from the Sea of ​​Japan and enter the estuary, where they lay eggs at the ...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/6888C12N15/11
CPCC12Q1/6888C12Q2600/124C12Q2600/156
Inventor 常玉梅梁利群孙博苏宝锋王维坤
Owner HEILONGJIANG RIVER FISHERY RES INST CHINESE ACADEMY OF FISHERIES SCI