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Strain construction method for improving robustness of saccharomyces cerevisiae

A technology of Saccharomyces cerevisiae and a construction method, applied in the field of bioengineering, can solve problems such as the difficulty in regulating the robustness of Saccharomyces cerevisiae in a rational system, achieve low energy and metabolic losses, achieve robustness, reduce cell metabolism and inhibit growth Effect

Pending Publication Date: 2020-10-02
BEIJING INSTITUTE OF TECHNOLOGYGY
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0006] The purpose of the present invention is to provide a method for dynamically enhancing the robustness of Saccharomyces cerevisiae to solve the problem that the rational system is difficult to adjust the robustness

Method used

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  • Strain construction method for improving robustness of saccharomyces cerevisiae
  • Strain construction method for improving robustness of saccharomyces cerevisiae

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Experimental program
Comparison scheme
Effect test

Embodiment 1

[0016] The industrial Saccharomyces cerevisiae strains were cultured in liquid media at 28°C, glucose concentration 20g / L, pH=5.0 (no stress condition) and 45°C, glucose concentration 100g / L, pH=5.0 (stress condition). The cultured cells were subjected to transcriptomic sequencing, and two sets of transcriptome data were obtained. The two sets of data were compared, and the gene HSP104 whose transcription level was higher under stress than under no stress was selected. It was found in the reference genome GCF_000146045.2_R64 The sequence 500 bases upstream of the start codon ATG of the corresponding gene was used as the stress-driven promoter HSP104p.

[0017] HSP104p was cloned from the genome, connected with the red fluorescent protein gene to form an expression cassette, and integrated into the chromosome of industrial Saccharomyces cerevisiae. The strains were cultured under the above-mentioned non-stress conditions and stress conditions respectively, and then the intensit...

Embodiment 2

[0020] The laboratory Saccharomyces cerevisiae strains were respectively incubated at 30°C, glucose concentration 30g / L, pH = 6.0 (no stress condition) and 33°C, glucose concentration 40g / L, pH = 3.0, acetic acid concentration 15g / L (stress condition) liquid cultured in culture medium. The cultured cells were subjected to transcriptomic sequencing, and two sets of transcriptome data were obtained. The two sets of data were compared, and the genes TPO2 and TPO3 whose transcription level was higher under stress than under no stress were selected. In the reference genome GCF_000146045.2_R64 The sequence of 700 bases upstream of the start codon ATG of the corresponding gene was found in the corresponding gene as the stress-driven promoter TPO2p, TPO3p.

[0021] TPO2p and TPO3p were cloned from the genome, respectively connected with the yellow fluorescent protein gene and the green fluorescent protein gene to form expression cassettes, and integrated into the chromosome of industr...

Embodiment 3

[0024] The industrial Saccharomyces cerevisiae strains were cultured in liquid medium at 32°C, glucose concentration 40g / L, pH=4.0 (no stress condition) and 37°C, glucose concentration 300g / L, pH=8.0 (stress condition). The cultured cells were subjected to transcriptomic sequencing, and two sets of transcriptome data were obtained. The two sets of data were compared, and the genes SOD1, SOD2, and GRX2 whose transcription level was higher under stress than under no stress were selected. In the reference genome GCF_000146045 .2_R64 found the sequence of 1000 bases upstream of the start codon ATG of the corresponding gene as the stress-driven promoters SOD1p, SOD2p, and GRX2p.

[0025] SOD1p, SOD2p, and GRX2p were cloned from the genome, respectively connected with the cyan fluorescent protein gene to form an expression cassette, and integrated into the chromosome of industrial Saccharomyces cerevisiae. The strains were cultured under the above-mentioned non-stress conditions and...

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Abstract

The invention provides a method for constructing a gene line in saccharomyces cerevisiae by utilizing a stress-driven promoter and an anti-stress gene so as to improve the robustness of the saccharomyces cerevisiae, belonging to the field of bioengineering. According to the invention, saccharomyces cerevisiae growing under no stress and saccharomyces cerevisiae growing under stress are subjected to transcriptomics sequencing respectively, and the stress-driven promoter is excavated according to transcriptional level; a fluorescent protein gene is used for verifying the stress-driven promoter;and the stress-driven promoter and the anti-stress genome are assembled into an expression cassette, integrated into the chromosome of saccharomyces cerevisiae for expression, and the growth performance of the obtained engineering strain under a stress condition is tested. By using the stress-driven promoter, the strain can respond to environmental stress, the anti-stress level of cells is adjusted according to environmental stress intensity, the situation that cell metabolism and growth are inhibited due to overexpression of multiple genes is reduced, and the robustness of the saccharomyces cerevisiae is improved.

Description

technical field [0001] The invention belongs to the field of bioengineering, and in particular relates to a method for constructing a gene circuit in Saccharomyces cerevisiae by using a stress-driven promoter and an anti-stress gene. Background technique [0002] Saccharomyces cerevisiae is a commonly used model single-celled fungus, often used in the fermentative production of ethanol and other chemicals. However, in the actual fermentation process of Saccharomyces cerevisiae, the cell viability, metabolic rate and ethanol production rate are far lower than the optimal culture conditions, because there are various stresses that inhibit the strains in the actual fermentation production. In actual fermentation production, fermentation is required to be carried out at as high a temperature as possible, which is conducive to increasing the substrate enzymatic hydrolysis rate, improving mass transfer efficiency, reducing cooling costs and reducing the risk of bacterial contamina...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12N1/19C12N15/65C12N15/81C12R1/865
CPCC12N15/65C12N15/81C12N2830/002
Inventor 秦磊李春
Owner BEIJING INSTITUTE OF TECHNOLOGYGY