Rice disease-resistant related gene OsDR10 and its application in rice disease resistance
A rice and gene technology, applied in the fields of application, genetic engineering, plant genetic improvement, etc., can solve problems such as unclearness, decline in yield and quality, and changes in rice disease resistance phenotypes.
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Embodiment 1
[0025] Example 1: Analysis of the expression pattern of OsDR10 gene in different rice varieties
[0026]In the previous research work of the present invention, the State Key Laboratory of Crop Genetic Improvement of the applicant used cDNA chip technology to analyze and found that the expression level of cDNA clone BI71N2 derived from rice variety Minghui 63 was expressed after rice variety IRBB10 was inoculated with bacterial blight strain PXO86 2.4 times lower than the control (Zhou et al., 2002). The applicant of the present invention sequenced the insert fragment of the BI71N2 clone and obtained a 690 bp cDNA sequence. The applicant used the BLASTN analysis method (Altschul et al., 1997) to search the expression tag (expressed sequence tag, EST) sequence database (Zhang et al., 2005) of the rice variety Minghui 63 with the cDNA sequence of BI71N2 clone, and found that the two segments were of different lengths The sequence of the cDNA clone EI87G08 is completely consisten...
Embodiment 2
[0029] Example 2: Isolation and clone OsDR10 gene and gene structure analysis
[0030] 1. Prediction of OsDR10 gene structure
[0031] Using the cDNA sequence EI87G08 of the OsDR10 gene as a template, the nucleotide database was searched by BLAST method (Altschul et al., 1997), and a 148626 bp sequence located on chromosome 8 of the rice variety Nipponbare in the database was found (the nucleotide database GenBank (http: / / www.ncbi.nlm.nih.gov) registration number: AP004460) a sequence (from 14046 to 14662 bp) has 100% homology with the EI87G08 sequence (E value = 0), suggesting that AP004460 contains genes homologous to OsDR10, ie alleles of OsDR10.
[0032] Using GENSCAN (http: / / genes.mit.edu / GENSCAN.html), GeneFinder (http: / / genomic.sanger.ac.uk / gf / gf.shtml), Gene Feature Searches (http: / / dot.imgen .bem.tmc.edu: 9331 / ), GeneMark (http: / / genemark.biology.gatech.edu / GeneMark / hmmchoice.html) and other gene structure prediction software analysis and prediction of homologous ge...
Embodiment 3
[0037] Example 3: Analysis of OsDR10 gene coding product
[0038] The coding region of the OsDR10 gene is located at 137-436 bp of the sequence shown in SEQ ID NO: 1 in the sequence table), and encodes a protein with a length of 100 amino acids. Analyzed by BLASTP (Altschul et al., 1997) and SMART (Simple Modular Architecture Research Tool, Letunic et al., 2006), the protein does not contain any known domains and motifs, indicating that it is a New type of protein.
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