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Kit for jointly detecting four deafness predisposing genes and application thereof

A joint detection technology of susceptibility genes for deafness, which is applied in the determination/inspection of microorganisms, biochemical equipment and methods, etc., can solve the problems of many false negatives and false positives, difficult interpretation of results, cumbersome operation, etc., to prevent false positives and false negative, increase Tm value, shorten the effect of primer length

Inactive Publication Date: 2012-07-04
上海芯鑫生物科技有限公司
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

These methods have different defects, such as cumbersome operation, difficult interpretation of results, poor repeatability, many false negatives and false positives, etc.

Method used

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  • Kit for jointly detecting four deafness predisposing genes and application thereof
  • Kit for jointly detecting four deafness predisposing genes and application thereof
  • Kit for jointly detecting four deafness predisposing genes and application thereof

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0044] The kit of the present invention detects mutations and DNA samples of normal individuals. The primers for the detection of the deaf susceptibility gene SLC26A4 mutation hotspot IVS7-2A>G are labeled with blue fluorescent dye, and the primers for GJB2235delC detection are labeled with green fluorescent dye, and are used for the Amelogenin locus, 12S rRNA 1494C>T, 1555A>G The primers for mutation detection are labeled with yellow fluorescent dye, and the internal standard is labeled with red fluorescent dye.

[0045] 1. The 1,000 samples to be tested have all been sequenced and detected by using the technical method of "DNA extraction-PCR amplification-sequencing". Among them, there were 10 samples of IVS7-2A>G mutation, 10 samples of GJB2235delC mutation, 10 samples of 12SrRNA 1555A>G mutation, and 1 sample of 1494C>T mutation.

[0046] 2. Genomic DNA extraction from samples

[0047] Chelex extraction method: Cut off 1-3mm blood spot and put it in a 1.5mL centrifuge tu...

Embodiment 2

[0065] The unmodified primers were used to detect DNA samples from normal individual blood spots at the same concentration (5.0ng / 25uL system). The labeled primers are the same as in Example 1. The non-labeled primers used for the detection of deaf disease susceptibility loci were the common primers corresponding to the primers in Example 1 without LNA modification.

[0066] 1. The sample to be tested is the same as the normal individual blood spot in Example 1.

[0067] 2. Genomic DNA extraction from samples

[0068] Genomic DNA was extracted by Chelex method.

[0069] 3. Detection and analysis of amplification and amplification products

[0070] 3.1PCR amplification system:

[0071]

[0072] 3.2 PCR amplification procedure: Same as Example 1.

[0073] 4. Fluorescent detection of the amplified product on a genetic analyzer

[0074] With embodiment 1.

[0075] 5 Conclusion

[0076] The result is as Figure 6 As shown, for male normal individuals, the G2 position (2...

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Abstract

The invention discloses a fluorescent detection kit for detecting four deafness predisposing genes simultaneously. The kit comprises reagents before amplification and reagents after amplification, wherein the reagents before amplification comprise a polymerase chain reaction (PCR) buffer solution, a reaction mixture of MgCl2 and deoxyribonucleoside triphosphates (DNTPs), Taq DNA polymerase, ultrapure water, and a primer mixture for amplifying loci of GJB2235delC, 12S rRNA 1555A>G mutation, 1494C>T mutation, IVS7-2A>G and Amelogenin at high specificity; and the reagents after amplification comprise a genotyping standard and an internal standard. Deafness gene loci of the GJB2235delC, 12S rRNA 1555A>G mutation, 1494C>T mutation, IVS7-2A>G and Amelogenin are simultaneously detected at high sensitivity and high specificity by combining a fluorescent labeling technology, a linolenic acid (LNA) nucleoside monomer doping-primer modification technology and a capillary electrophoresis technology for the first time, manpower and material resources and time are greatly saved, and pollution due to multi-step operation is prevented.

Description

technical field [0001] The invention relates to a fluorescent detection kit for simultaneously detecting four deaf susceptibility genes, belonging to the technical field of biological detection. Background technique [0002] Worldwide studies on the pathogenic factors of hearing and speech disabilities show that about 60-80% of the patients are caused by genetic factors, and clinical research data from developed countries show that hereditary deafness accounts for about 80% of deafness patients. Therefore, in the past ten years, the research on the pathogenesis and molecular epidemiology of hereditary deafness has become one of the most important contents of deaf research. With the completion of the Human Genome Project, great progress has been made in the positioning and cloning of deafness genes. The molecular genetics research and molecular epidemiological data of deafness have enabled researchers to gradually realize that mutations in susceptibility genes for deafness pl...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68
Inventor 万戈江魏宏泉步讯夏子芳
Owner 上海芯鑫生物科技有限公司
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