Novel and practical litopenaeus vannamei RNA (ribonucleic acid) virus fast detection kit and detection method
A technology of RNA virus and detection kit, which is applied in the field of rapid detection kit for Litopenaeus vannamei RNA virus, which can solve the problem of easy contamination of LAMP reaction reagents, false positive results, limitations in the application performance of LAMP detection kits, and unfavorable promotion and application of LAMP reactions and other problems, to achieve the effect of simplifying the steps of RNA extraction, improving operability and simplifying operation
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Embodiment 1
[0037] (1) Design, synthesis and screening of RT-LAMP detection primer set for TSV virus
[0038] Find the gene sequence of Litopenaeus vannamei TSV virus in the Genebank database, upload the TSV sequence to the online software PrimerExplorerV4 (http: / / primerexplorer.jp / e / ) to search for LAMP primers, and obtain the 5 sets of LAMP primer sequences according to The synthesis was carried out in the order of 5'→3', and the total RNA of diseased shrimp containing TSV virus detected by RT-nestedPCR was used as a template, and 5 sets of primers were used for RT-LAMP reaction, and water and shrimp DNA templates were used as controls, and the reaction products were condensed. Gel electrophoresis, and a set of primers with the brightest and clearest bands was selected as the detection primer set.
[0039] The TSV viral LAMP detection primer set obtained by screening is:
[0040] Upstream outer primer F3: 5'-TTCACAGATCATCGACATCT-3';
[0041] Downstream outer primer B3: 5'-TAGGAGAGACTG...
Embodiment 2
[0056] (1) Design, synthesis and screening of RT-LAMP detection primer set for CMNV virus
[0057] Find the gene sequence of Litopenaeus vannamei CMNV virus RNA2 in the Genebank database, upload the gene sequence of CMNV RNA2 to the online software PrimerExplorerV4 (http: / / primerexplorer.jp / e / ) to search for LAMP primers, and obtain 5 sets of LAMP primer sequences , were synthesized according to the order of 5'→3', and the total RNA of diseased shrimp containing CMNV virus detected by RT-nestedPCR was used as a template, and 5 sets of primers were used for RT-LAMP reaction, and water and shrimp DNA templates were used as controls. The products were subjected to gel electrophoresis, and a set of primers with the brightest and clearest bands was selected as the detection primer set.
[0058] The RT-LAMP detection primer set of the CMNV virus obtained by screening is:
[0059] Upstream outer primer F3: 5'-AGAGCAGAATTTCCAGTCAG-3';
[0060] Downstream outer primer B3: 5'-ATATTGAA...
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