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A simplified extraction method of total dna from blueberry fruit

An extraction method and fruit technology, applied in the field of DNA extraction, can solve the problems of affecting the purity, cumbersome operation, not taking into account the differences of different samples, etc., and achieve the effects of avoiding pollution, high safety, and time-consuming

Active Publication Date: 2020-05-12
FRUIT TREE INST OF CHINESE ACAD OF AGRI SCI
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0003] The research of blueberry DNA inevitably involves the extraction of total DNA in blueberry fruit. At present, the most commonly used DNA extraction method is the conventional CTAB method. sex
Because blueberry fruit contains more polysaccharides, polyphenols and pigments, these substances are easy to bind to DNA, which affects the purity of extracted DNA

Method used

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Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0022] A simplified blueberry fruit total DNA extraction method comprises the following steps:

[0023] S1, Material pretreatment: Collect 1g of blueberry fruit, mash it, add 5ml of 0.1mol / l sodium hydroxide solution, grind it into a slurry, incubate at 65±1°C for 10min, shake 3 times during the period, add 0.1mol / l formic acid The pH of the solution is adjusted to 6.0 to obtain pretreated blueberry pulp;

[0024] S2, add 1ml of the mixed solution to 1ml of the pretreated blueberry pulp, and the ratio of 0.1mol / l formaldehyde solution, vitamin C and DNA extract in the mixed solution is 1ml:0.01g:20ml, water bath at 37±1°C for 20min ;Centrifuge at 12000rpm for 10min, collect the supernatant;

[0025] Among them, 1L DNA extract contains 0.1mol Tris-HCl, 0.1mol EDTA, 1.5mol NaCl, 10gCTAB, the solvent is double distilled water, pH 8.0;

[0026] S3, add isopropanol equivalent to 0.6 times the volume of the supernatant that has been pre-cooled at 4°C to the supernatant, mix well, ...

Embodiment 2

[0029] A simplified blueberry fruit total DNA extraction method comprises the following steps:

[0030] S1, material pretreatment: collect 2g blueberry fruit, crush it, add 10ml 0.1mol / l sodium hydroxide solution, grind it into a slurry, incubate at 65±1°C for 10min, shake 4 times during the period, add 0.1mol / l acetic acid The pH of the solution is adjusted to 6.0 to obtain pretreated blueberry pulp;

[0031] S2, add 2ml of mixed solution to 2ml of pretreated blueberry pulp, and the ratio of 0.1mol / l formaldehyde solution, vitamin C and DNA extract in the mixed solution is 1ml:0.05g:30ml, water bath at 37±1°C for 20min ;Centrifuge at 12000rpm for 10min, collect the supernatant;

[0032] Among them, 1L DNA extract contains 0.1mol Tris-HCl, 0.1mol EDTA, 1.5mol NaCl, 10gCTAB, the solvent is double distilled water, pH 8.0;

[0033] S3, add isopropanol equivalent to 0.8 times the volume of the supernatant that has been pre-cooled at 4°C to the supernatant, mix well, place at -20...

Embodiment 3

[0036] A simplified blueberry fruit total DNA extraction method comprises the following steps:

[0037] S1, material pretreatment: collect 2g blueberry fruit, crush it, add 10ml 0.1mol / l sodium hydroxide solution, grind it into a slurry, incubate at 65±1°C for 10min, shake 4 times during the period, add 0.1mol / l acetic acid The pH of the solution is adjusted to 6.0 to obtain pretreated blueberry pulp;

[0038] S2, add 2ml of mixed solution to 2ml of pretreated blueberry pulp, and the ratio of 0.1mol / l formaldehyde solution, vitamin C and DNA extract in the mixed solution is 1ml:0.03g:25ml, water bath at 37±1°C for 20min ;Centrifuge at 12000rpm for 10min, collect the supernatant;

[0039] Among them, 1L DNA extract contains 0.1mol Tris-HCl, 0.1mol EDTA, 1.5mol NaCl, 10gCTAB, the solvent is double distilled water, pH 8.0;

[0040] S3, add 0.7 times the volume of isopropanol pre-cooled at 4°C to the supernatant collected in S2, mix well, place at -20°C for 45 minutes, centrifug...

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Abstract

The invention belongs to the technical field of DNA extracting methods, and particularly relates to a simplified method for extracting total DNA from blueberry fruits. The method comprises the following steps: pretreating a material by using a sodium hydroxide solution and an organic acid solution, extracting DNA by using a mixed solution of an aldehyde solution, vitamin C and a DNA extracting solution, precipitating by using isopropyl alcohol, washing by using ethanol, and the like. By the method, the DNA extracting time is short, the DNA purity is high, the extracted DNA solution is transparent in color, and pollution of a pigment and polyphenol oxidation is avoided, so that the method is especially suitable for extraction of the total DNA from the blueberry fruits.

Description

technical field [0001] The invention belongs to the technical field of DNA extraction methods, and in particular relates to a simplified method for extracting total DNA from blueberry fruits. Background technique [0002] Blueberry belongs to Rhododendronaceae, Vaccinium genus, dark blue fruit, spherical or oblate, about 1cm in diameter, thin peel, blue-purple ripe fruit, sweet and sour taste, high edible. Blueberry fruit is rich in polysaccharides, pigments, pectin, and DNA that retains genetic information. Due to the differences in the DNA of different blueberry varieties, the study of the relationship between DNA and blueberry phenotypes has a good application prospect in blueberry breeding and variety improvement. [0003] The research of blueberry DNA inevitably involves the extraction of total DNA in blueberry fruit. At present, the most commonly used DNA extraction method is the conventional CTAB method. sex. Because blueberry fruit contains more polysaccharides, p...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12N15/10
Inventor 宋杨刘凤之张红军王海波刘红弟
Owner FRUIT TREE INST OF CHINESE ACAD OF AGRI SCI