Antigenic epitopes, antibodies, identification methods and applications of Newcastle disease virus matrix proteins
A technology for Newcastle disease virus and antigenic epitope is applied in the field of antigenic epitope of Newcastle disease virus matrix protein, which can solve the problems of less disclosure of technology and achieve the effect of simple and convenient identification system.
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[0047] A method for identifying the dominant antigenic epitope of M protein B cells of Newcastle disease virus LaSota strain is as follows:
[0048] Step 1: NDV LaSota strain M protein (amino acid sequence is SEQ ID NO.7)) is carried out secondary structure analysis with DNAStar Protean software; Use online database Immune Epitope Database (IEDB), ABCpred, Bcepred comprehensively to LaSota strain M protein Predict B cell epitopes; use the following seven prediction schemes: hydrophilicity scheme, protruding surface and corner scheme, surface accessibility scheme, flexibility scheme, polarity scheme, antigenicity scheme; as shown in Figure 1, M The protein has abundant α-helix, β-sheet and turn structures, strong hydrophobicity, high surface accessibility and antigenic index; and there are about 9 linear epitopes with high scores and stable existence in the M protein, of which The locations are as follows: 28-39, 48-56, 77-85, 118-126, 157-169, 223-233, 244-253, 296-311 and 345...
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