Antigen epitope, antibody, identification method and application of Newcastle disease virus matrix protein
A technology for Newcastle disease virus and antigenic epitope is applied in the field of antigenic epitope of Newcastle disease virus matrix protein, which can solve the problems of less disclosure of technology and achieve the effect of simple and convenient identification system.
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[0047] A method for identifying the dominant antigenic epitope of Newcastle disease virus LaSota strain M protein B cells is as follows:
[0048] Step 1: Use DNAStar Protean software to analyze the secondary structure of NDV LaSota strain M protein (amino acid sequence is SEQ ID NO. 7)); use online database Immune Epitope Database (IEDB), ABCpred, Bcepred to comprehensively analyze LaSota strain M protein B cell epitopes were predicted; using the following 7 prediction schemes: hydrophilic scheme, protruding surface and turning scheme, surface accessibility scheme, flexibility scheme, polarity scheme, antigenicity scheme; as shown in Figure 1, M The protein has abundant α helix, β sheet and turn structure, strong hydrophobicity, high surface accessibility and antigen index; and there are about 9 linear epitopes with high score and stable existence in the M protein, among which The locations are as follows: 28-39, 48-56, 77-85, 118-126, 157-169, 223-233, 244-253, 296-311 and 34...
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