Early screening method and kit of ankylosing spondylitis susceptibility gene
A technology for ankylosing spondylitis and susceptibility genes, applied in biochemical equipment and methods, microbiological determination/testing, DNA/RNA fragments, etc.
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Embodiment 1
[0101] Feasibility analysis of SNP site screening of human ankylosing spondylitis susceptibility-related genes
[0102] The inventors screened and evaluated the occurrence-related sites of ankylosing spondylitis that were verified in large-scale pathological control group clinical studies by searching NCBI's domestic and foreign genome-wide association study (GWAS). Selected 14 single nucleotide polymorphism sites that are significantly related to the risk of ankylosing spondylitis in the Chinese population, and are independent of each other, there is no linkage disequilibrium, so the site selection of the present invention is representative, independent and Risk values are cumulative and can be used to assess an individual's risk of developing ankylosing spondylitis.
[0103] The screened SNP sites are as follows:
[0104] rs3091244, rs10865331, rs11624293, rs4937362, rs2275913, rs6693831, rs1884444, rs14170, rs2123111, rs1729674, rs2910164, rs3746444, rs7574865, rs2302589...
Embodiment 2
[0105] Embodiment 2 system verification
[0106] System validation includes accuracy, specificity, sensitivity, precision, and comparison among personnel.
[0107] Accuracy verification scheme: 20 cases were detected at each site, compared with Sanger sequencing, the expected target was 95%.
[0108] Specificity Validation Protocol: Included in Accuracy, expected target 95%.
[0109] Sensitive verification scheme: using human genomic DNA positive samples as templates, the DNA contents of calibration samples were 1ng / μL, 5ng / μL, 10ng / μL, 50ng / μL, and 100ng / μL for sensitivity inspection.
[0110] The precision verification plan (including intra-batch, inter-batch, and personnel comparisons, not involving inter-instrument comparisons) has an expected target of 95%.
[0111] Intra-assay precision: The same batch of each sample was repeated 3 times to compare the intra-assay precision.
[0112] Inter-batch precision: The same operator tests the same sample in multiple batches to...
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